ggKbase home page

H3-16-all-fractions_k255_974091_1

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: 2..304

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK70_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 82.0
  • Bit_score: 121
  • Evalue 2.90e-25
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:EEF59708.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 82.0
  • Bit_score: 121
  • Evalue 4.10e-25
RNA-binding protein (RRM domain) similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 95.0
  • Bit_score: 108
  • Evalue 7.20e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 303
CGAATTGCTCCAACACTCAAATACATGAAACTCTACGTAGGAAATCTTTCCTTCGATACTACCGAGAACGATCTTCAGGATCTTTTCGAACAACACGGCGCGGTCACCGAAGTGGCGCTCGTCAATGATCGCGTCACCGGCCGCTCGCGCGGCTTCGCTTTTGTTACGATGAGCGATGCCACGGCAGCGACTGCCGCCATCAACGCCCTGAACGGCAAACAAGTCCAGGGACGTGCCCTGACGGTTAATGAAGCGCGCGCCCGCGAAGAGCGTCCGCGCCAGTTCTCCGGTTCGCGCCGCTAA
PROTEIN sequence
Length: 101
RIAPTLKYMKLYVGNLSFDTTENDLQDLFEQHGAVTEVALVNDRVTGRSRGFAFVTMSDATAATAAINALNGKQVQGRALTVNEARAREERPRQFSGSRR*