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H3-16-all-fractions_k255_1717985_4

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(1137..1469)

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRV6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 100.0
  • Bit_score: 125
  • Evalue 1.70e-26
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:EEF57415.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 100.0
  • Bit_score: 125
  • Evalue 2.40e-26
RNA-binding proteins (RRM domain) similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 106.0
  • Bit_score: 114
  • Evalue 1.90e-23

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 333
ATGAATCCCACACGGCTCTTCGTAGGCAACTTGTCCTATCAGACCATGGAAAATGATCTTCAGGATTATTTTGCCCAGGCTGGCGCAGTTAACTCGGTCAACCTCATGCTGGACAAGATGACCGGCAAATCCCGCGGCTTTGCATTCATCGAATTTGCGAATTCGGATGAAGCGAACAAGGCCATCGAGCAGTTTCACAACAAAGAATTTCAAGGCCGCGCGCTCACAGTGAATATTGCGCGCCCGCGTGAAGAACGCCCGCAACAGCAGCGCTGGAGTGGCGGCGGCGGTGGTGCACGCGAAGGCGGTTACGAGCGCCGCGATCGCCCATAA
PROTEIN sequence
Length: 111
MNPTRLFVGNLSYQTMENDLQDYFAQAGAVNSVNLMLDKMTGKSRGFAFIEFANSDEANKAIEQFHNKEFQGRALTVNIARPREERPQQQRWSGGGGGAREGGYERRDRP*