ggKbase home page

H3-16-all-fractions_k255_1717985_6

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(2113..2832)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDK1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 260.0
  • Bit_score: 296
  • Evalue 2.00e-77
Pseudouridine synthase {ECO:0000313|EMBL:EEF62147.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 260.0
  • Bit_score: 296
  • Evalue 2.90e-77
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 234.0
  • Bit_score: 153
  • Evalue 6.10e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 720
GTGCCGAAACCCAATTACATCGAGCTGCCGACGGGGGAAACAATTCCGATTCTTTATGAGGATCGTTCGGTGCTCGCCATTGACAAACCGCCCGGGTGGATGCTCGTGCCGCCCACGTGGCAAAAGACCAGCCGCAATCTCCAGATGGCTCTTACGTCATCGATAGCCGCGAAGGATTTCTGGGCGCGCTCGCGCAACCTGAAATTTCTGCGATTTGTGCATCGGCTCGATGCCGACACGACCGGGATTTTGTTGCTGGCGAAAAGCCCGGGAGCGGTGAATACGTTTGGTGACATGTTCGAGAGTCGAAATATGGAGAAGGTTTATCTCGCGGTGGTTATCGGCGTGCCGAAAGAAAGCGAATGGACCTGTCGCCTCAAGCTGGGTCCCGATCCGGACACGCGCGCGAAAATGAAAGTGGACGCACGCGAAGGCAAAGAGGCCGAGACCACGTTTCGCGTGCTCCAAACGCAAGCACAGGTCGCCTTGGTTGAGGCCCATCCGTTTACCGGGAGAACGCATCAGATTCGCGTCCACCTGGCTGAGAGCGGCCACCCGGTCGTCGGCGATGAACTTTATGGCCGGGTGGACAGAAGAGGCCTTGCCTTACGCGCCGTGGGTTTGGCTTATGGCGACCCGTTTACCGGTCGCAAGGTGCGCATTCGCGCGCCCGGGGATGAATTTTGCCGGAAATATGGATTCGAACCCCAAAAACTTTGA
PROTEIN sequence
Length: 240
VPKPNYIELPTGETIPILYEDRSVLAIDKPPGWMLVPPTWQKTSRNLQMALTSSIAAKDFWARSRNLKFLRFVHRLDADTTGILLLAKSPGAVNTFGDMFESRNMEKVYLAVVIGVPKESEWTCRLKLGPDPDTRAKMKVDAREGKEAETTFRVLQTQAQVALVEAHPFTGRTHQIRVHLAESGHPVVGDELYGRVDRRGLALRAVGLAYGDPFTGRKVRIRAPGDEFCRKYGFEPQKL*