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H3-16-all-fractions_k255_1958500_2

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(4579..6183)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI24_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 532.0
  • Bit_score: 585
  • Evalue 4.90e-164
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 532.0
  • Bit_score: 585
  • Evalue 6.90e-164
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 530.0
  • Bit_score: 375
  • Evalue 1.70e-101

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1605
ATGTCCGTCGCGCAAAATGACACCGACCTGGTCAACGAGAGCCTCTCCGGCAATCGCGACGCCTTCGGCGAAATCGTTGCGCGGTATCAATCGCTGATTTGTTCACTTGCCTACAGCGCCACCGGCAACCTGAGCCAGAGTGAAGACCTTGCGCAGGAAACGTTCGTCACTGCCTGGAAACAGCTCCGCAATTTGCGCGAGCCTGCGAAGCTGCGCTCCTGGCTTTGCGCCATCACGCGCAATCTTGTCCACAATTGGTTCCGCTCACAGGGCCGCGAACCGAGCCATGCGGCGGCGCCACTCGAAGAAATTTCCGAGTCACAAGCTCCCGAGCCATTGCCGTTGGAACAAACGATCAGCAAAGAGGAGCAAGCGATTCTGTGGCGTTCGTTGGAGCATATTCCCGAAACTTACCGTGAGCCGCTGGTATTGTTTTACCGCGAGCACCAGTCGATCGAGCGCGTGGCGGAGAATCTTGAACTGAGCGAAGACGCGGTGAAGCAGCGGTTGTCGCGCGGGCGCAAATTATTGCATGAGCAGGTGCTCGCCTTTGTTGAAGGCGCATTGGAGCGGACCAATCCAGGCAAGGCATTTACTATCGGCGTGCTGGCGGCATTGCCGGTTTTGACGCTTTCGGCCAAAGCGGCCACGCTCGGCGCGGCCGCTGCCAAAGGAACCGCTACCGCCAAAGTGGCCGCCACGTCAGGAATCCTGGGCGCGGTCCTCGGTCCGTTCTTAATCGTGTTTGGCAATTACGTCGGCTATCGGATGAATCTCGATGCGGCAAGTTCGGAGCGCGAAGCGGAATACATCAAAAGTTTTTATCGCAAACTCGTGCTCTGCATCCTGGGCTTCTCTGTAGCGTTCGGGGTGCTGATACTGGCCATGAAGCCTTTTATTACGAACCATCATCTGCTGTTTACGGCTTTGCTGATCGGCGTTGTGATTGCCTACTTGATCTCGATTGCAGCTCTGTCCGTTTGGTCGTGGCGGAGCCGGCGAAAACTTCTTGGGCAACTCGACGATGTCGACAATGCCGCGCGCAGTCGGCAACCGGCCTGGGAATATCGAAGCAAGTGGGGCTTTCTGGGACTGCCGCTGGTTCATTGCCGTGTCGGTGGCGGCATCGGGGCGCATCGAAATGTCGTCAAGGCATGGATAGCTGTCGGCGATTGCGCAATAGGCGGGTTGCTCGCATTCGGTGGAGTGGCGATTGCCCCGTTCAGCATCGGTGGAGTGGCCATCGGCTTCGTGCCCTTCGGCGGTTGTGCGCTCGGCGTGCTGGCGCTTGGGGGATTAGGCGTGGGATTCTGGGCGTTTGGCGGACTGGCGGTCGGCTGGCAGGCCTTTGGAGGATGTGCCCTGGCATGGAGCGCCGCGTGTGGCGGCGCAGCAATCGCGCACGACTTTGCCGTTGGAGGGTTCGCCAACGCGTTGCAGGCAAACAGTGACGCGGCAAAGTATTTTGTCCAAAACACCTTTTTCTTCAATGCGGCGGAGAAACTCTCGCGCTACTCCATCTGGACAAACCTGATTTGGATACTGCCAATGATGTTCTGGTGGCGGAAAGTCAAACGCGCGCGCATTCAACAAGCCGCCGCCTGA
PROTEIN sequence
Length: 535
MSVAQNDTDLVNESLSGNRDAFGEIVARYQSLICSLAYSATGNLSQSEDLAQETFVTAWKQLRNLREPAKLRSWLCAITRNLVHNWFRSQGREPSHAAAPLEEISESQAPEPLPLEQTISKEEQAILWRSLEHIPETYREPLVLFYREHQSIERVAENLELSEDAVKQRLSRGRKLLHEQVLAFVEGALERTNPGKAFTIGVLAALPVLTLSAKAATLGAAAAKGTATAKVAATSGILGAVLGPFLIVFGNYVGYRMNLDAASSEREAEYIKSFYRKLVLCILGFSVAFGVLILAMKPFITNHHLLFTALLIGVVIAYLISIAALSVWSWRSRRKLLGQLDDVDNAARSRQPAWEYRSKWGFLGLPLVHCRVGGGIGAHRNVVKAWIAVGDCAIGGLLAFGGVAIAPFSIGGVAIGFVPFGGCALGVLALGGLGVGFWAFGGLAVGWQAFGGCALAWSAACGGAAIAHDFAVGGFANALQANSDAAKYFVQNTFFFNAAEKLSRYSIWTNLIWILPMMFWWRKVKRARIQQAAA*