ggKbase home page

H3-16-all-fractions_k255_1486424_8

Organism: H3-16-all-fractions_metab_conc_83

partial RP 35 / 55 MC: 6 BSCG 34 / 51 MC: 7 ASCG 10 / 38 MC: 1
Location: 4802..5350

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGI9_THEM7 similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 169.0
  • Bit_score: 126
  • Evalue 2.10e-26
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 169.0
  • Bit_score: 126
  • Evalue 6.00e-27
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADU50535.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 169.0
  • Bit_score: 126
  • Evalue 3.00e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermaerobacter marianensis → Thermaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 549
GTGCAGCAGGCCCGCGCCGGCAAGCTCGAGGCTTTTGAGACGCTCGTCCGGCGACATCAGGGCGTGGCATACCGCGTGGCGCGTCGCCTGGTCGGACCGGACGACGCGGACGACGTTACGCAGGATGCGTTCCTGCGGGCGTTCCACCGGCTCGGCCACTATCGCGGGGAGGGGTCGTTCCGTGCCTGGGTCCTGCAGATCGTGCGCAACACCGCGCTCAACGCGATCGAGGCCCGACGGACCGAGCCATACGAAGCCATCGGCGAGCTCGTCGAGGCGGGACCCGCGGGCTCGGCGCGAACGCCCGTGGACCAGCTCGAGGGCCGGGAGCGCCGCGAGCGTCTCGAGGCGAAGGTGCGCCTGCTGCCGCCGGCCCACCGGACGGTCCTCGTGCTACGCGACATCGAAGGCTTCAGCTACGAGGAGGTCGCGGCGGTGACCGAGACGCCGGTTGGAAGCGTCAAGGGCCGTTTGCATCGCGCGCGCAGCGAGCTGATTCGCATTCTGCGCGAGAACACCTACGACTGGGGACTCCCGCATGAGCTCTGA
PROTEIN sequence
Length: 183
VQQARAGKLEAFETLVRRHQGVAYRVARRLVGPDDADDVTQDAFLRAFHRLGHYRGEGSFRAWVLQIVRNTALNAIEARRTEPYEAIGELVEAGPAGSARTPVDQLEGRERRERLEAKVRLLPPAHRTVLVLRDIEGFSYEEVAAVTETPVGSVKGRLHRARSELIRILRENTYDWGLPHEL*