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H3-16-all-fractions_k255_7357890_2

Organism: H3-16-all-fractions_metab_conc_83

partial RP 35 / 55 MC: 6 BSCG 34 / 51 MC: 7 ASCG 10 / 38 MC: 1
Location: comp(1753..2628)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NTM2_STRVO similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 296.0
  • Bit_score: 404
  • Evalue 6.50e-110
RNA polymerase sigma 70 {ECO:0000313|EMBL:KJK55418.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 292.0
  • Bit_score: 405
  • Evalue 4.10e-110
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 296.0
  • Bit_score: 404
  • Evalue 1.80e-110

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Taxonomy

Saccharothrix sp. ST-888 → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
GTGGACGAGCACGAGTGGATCGCGGAGCGCTTCGAGGAGCATCGGACCCATCTGCGCGCGGTGGCCTATCGCATGCTCGGCTCGCTGAGCGAGGCGGACGATGCCGTCCAGGAGGCGTGGCTGCGGCTCAATCGCTCCGACGCCGAGGACATCGAGAACCTCGGCGGCTGGCTCACCACTGTGGTCGCGCGCGTGTCTTTGAACATGCTCCGCTCGCGCGCCTCGCGGCGCGAGGAGCCGATGGGCGTGCGCGTGCCGGAGCCGATCGTGGATCGCGAGGATGGGACCGATCCCGAGCACGAGGCTTTGCTCGCCGATTCGGTTGGCCTCGCGCTGCTCGTCGTGCTCGAGACGCTTACTCCCGCCGAGCGGCTCGCGTTCGTGCTCCACGACATGTTCGCCGTCCCGTTCGACGAGATCGCGCCGATCGTGGACCGCACGCCGGAGGCAGCGCGGCAGCTCGCGAGCCGTGCGCGCCGGCGGGTGCACGCCCAGAACACGGTTCCCGACGCCGACCTCGACCGCCAGCGTGAAGTCGTCGACGCGTTCCTCGCCGCCGCTCGCGAGGGTGACTTCGACGCGCTCGTGGCGGTGCTCGACCCGGATGTGGTGCTGCGCGCCGATTTCGGAGTGGGGCCTGGGAGGGAGGTTCGAGGTGCCGAGGCGGTCGCCGGCCAAGCGGTCGGCTACTCGCAGATGGGCCTCGTCATGCACCGCGCGCTGATCAACGGTGTGGCTGGGCTCGTCTCGATGCGCGATGGTCGCCTGTTCTCGGTCGGCGGCTTCACGATCAGACACGGGAAGATCGTCGCGATGGACATCCTGGCCGACCCCGAGCGCCTCGCCCGGCTCGACTTGACGGTGCTCGAGGACTGA
PROTEIN sequence
Length: 292
VDEHEWIAERFEEHRTHLRAVAYRMLGSLSEADDAVQEAWLRLNRSDAEDIENLGGWLTTVVARVSLNMLRSRASRREEPMGVRVPEPIVDREDGTDPEHEALLADSVGLALLVVLETLTPAERLAFVLHDMFAVPFDEIAPIVDRTPEAARQLASRARRRVHAQNTVPDADLDRQREVVDAFLAAAREGDFDALVAVLDPDVVLRADFGVGPGREVRGAEAVAGQAVGYSQMGLVMHRALINGVAGLVSMRDGRLFSVGGFTIRHGKIVAMDILADPERLARLDLTVLED*