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H3-16-all-fractions_k255_9113171_3

Organism: H3-16-all-fractions_metab_conc_83

partial RP 35 / 55 MC: 6 BSCG 34 / 51 MC: 7 ASCG 10 / 38 MC: 1
Location: comp(2590..3261)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:AKG53066.1}; TaxID=943347 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.1
  • Coverage: 205.0
  • Bit_score: 110
  • Evalue 1.60e-21
RNA polymerase sigma-70 factor, ECF subfamily id=2777671 bin=GWC2_Chloroflexi_73_18 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 171.0
  • Bit_score: 105
  • Evalue 6.20e-20
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 194.0
  • Bit_score: 103
  • Evalue 5.10e-20

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Taxonomy

Dehalogenimonas sp. WBC-2 → Dehalogenimonas → Dehalococcoidia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 672
ATGGCGGTTGGGTCCCCGCGTTCCAAGAGTCAGGCCGCTTCACACGCGAGCGGCATTCCTCCGCTGTTCGAGCACACGCGATCGATCGTCGACGACGCCGCGGAGCGGCGGCGCACGGCAGTCGCGGTCGCGCAGGTCCTCGACGGTGACCCCGAGGGGCTCAGCTACCTCTATTCGCGGTACTCCGGCCCGGTGTACTCGTACGTCTGCAGCATCGTCCGTGATCGTGACGATGCCGCCGACGTCACCCAGCAGGTCTTCCTCAAGCTGATAACGGCGTTCCCGCAGTACGACGTGCGGCGGGCCCGCTTCGCTGCATGGATCCTGCGTGTGGCGCGTAACGCTGCGATCGACTGGCTCAGGGGATCGCGCGGCGCCGTGTCGGCGCCGGACGCGATCGAGCTCGCACATGAGGACGCTGCGACGGGCAACGACCGCGAGGTGCTCCGCCACGCGCTCGCCGAACTCACGGACGGCCAGCGCAAGGTGCTCTTTCTTCGCGAGCATGTCGGCCTGCCCGCCTGCGAGGTCGCGCGGCGGCTCGGCAAGCGCGAGGCTGCGGTGCACACGATGCACCACCGTGCTCGTGTTGCGGCGCGGCGCAGATTGCTGGAGATGGACGTCATGCCGGCCACAGGACGCTCGCGGGAGCTCGAGCCGCAGGCGGCGTAA
PROTEIN sequence
Length: 224
MAVGSPRSKSQAASHASGIPPLFEHTRSIVDDAAERRRTAVAVAQVLDGDPEGLSYLYSRYSGPVYSYVCSIVRDRDDAADVTQQVFLKLITAFPQYDVRRARFAAWILRVARNAAIDWLRGSRGAVSAPDAIELAHEDAATGNDREVLRHALAELTDGQRKVLFLREHVGLPACEVARRLGKREAAVHTMHHRARVAARRRLLEMDVMPATGRSRELEPQAA*