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H3-18-all-fractions_k255_1769016_3

Organism: H3-18-all-fractions_metab_conc_20

partial RP 29 / 55 MC: 6 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 2
Location: comp(1765..2292)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 type 2 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHY3_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 174.0
  • Bit_score: 186
  • Evalue 2.20e-44
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 163.0
  • Bit_score: 186
  • Evalue 6.20e-45
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:AIY18108.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 163.0
  • Bit_score: 186
  • Evalue 3.10e-44

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Taxonomy

Pimelobacter simplex → Pimelobacter → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 528
GTGAACTCGATCGCAGCAGTCATCGGCGCAGAGGAGTCGGTCATCGACGCTGACACCGCTCTGGCGGAGCTGTACGCCGGCCACTACGCGCGCCTGGTCCGTCTGGCGGTGCTGCTCCTGCGCGACCAGGCGCTCGCCGAGGACGTCGTGCAGGACTCGTTCGTCGCGGTGCACCAGCGATGGCGCCGGATCGACCAGGGCACGGCGCCGGCCTACCTGGCCCGCACCGTCGTCAACCGCTCCCGCAGCGCGCTGCGCCACCGCACCGTGGTCGCCCGGCACCGACCCGAACCCGCGCCCGACGCCGCCGGGGCCGACGTCCCGGTGCTCGCCAACGAAAGGCGCGGTGCGGTCCTCGACGCGCTCGCCGCCCTGCCGACGCGGCAGCGCGAGGTGCTGGTGCTGCGCTACTACCTCGACTACTCCGAGCGCGAGATCGCCTCCGCCCTCGGTATCAGCCAAGGGGCCGTGAAAGCCCACGCCTCCCGAGGCGCTGCCGCCCTCCGAACCAGCCTGGAGAAGTCATGA
PROTEIN sequence
Length: 176
VNSIAAVIGAEESVIDADTALAELYAGHYARLVRLAVLLLRDQALAEDVVQDSFVAVHQRWRRIDQGTAPAYLARTVVNRSRSALRHRTVVARHRPEPAPDAAGADVPVLANERRGAVLDALAALPTRQREVLVLRYYLDYSEREIASALGISQGAVKAHASRGAAALRTSLEKS*