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H3-18-all-fractions_k255_3274421_3

Organism: H3-18-all-fractions_metab_conc_20

partial RP 29 / 55 MC: 6 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 2
Location: comp(1816..2115)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000255|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 96.0
  • Bit_score: 165
  • Evalue 2.40e-38
DNA-directed RNA polymerase subunit omega n=1 Tax=Kribbella catacumbae RepID=UPI0003629AFB similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 96.0
  • Bit_score: 166
  • Evalue 1.00e-38
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 96.0
  • Bit_score: 165
  • Evalue 4.90e-39

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Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGAGCGTGTCCGGCAATCAGCCCGTCGCCCTGGGTATCACCAACCCCCCGATCGACGACCTGCTGACCAAGACCGACTCCAAGTACAAGCTGGTGCTCTACAGCGCCAAGCGTGCTCGGCAGATCAACGCCTACTACTCCCAGCTCGGCGAAGGCCTGCTGGAGTACGTCGGCCCGCTGGTGGACACCCACGTCCAGGAGAAGCCGCTGTCCATCGCCATGCGCGAGATCAACGAGGACCTCCTCGTCTGCGAGGACATCGACCCTGATGAAGTCGCAGCGGAGGCTGCGGCCGAGTGA
PROTEIN sequence
Length: 100
MSVSGNQPVALGITNPPIDDLLTKTDSKYKLVLYSAKRARQINAYYSQLGEGLLEYVGPLVDTHVQEKPLSIAMREINEDLLVCEDIDPDEVAAEAAAE*