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H3-18-all-fractions_k255_797254_6

Organism: H3-18-all-fractions_metab_conc_20

partial RP 29 / 55 MC: 6 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 2
Location: 3721..4257

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 170.0
  • Bit_score: 283
  • Evalue 1.10e-73
Peptide deformylase n=1 Tax=Nocardioides sp. CF8 RepID=R7XU99_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 170.0
  • Bit_score: 283
  • Evalue 7.80e-74
formylmethionine deformylase similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 170.0
  • Bit_score: 266
  • Evalue 2.80e-69

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 537
GTGAGCGAGGACGCCACGTTCTACGGCGTCGTCGGGAAGGTCCTGGACGTGGTCCGGGCCCCCGACCCGGTGCTGTCGCGCCCAGGGGAGCCCGTCGATCCGACCGCGCCCGAGGTCGTGCAGCTCGCGGCCGACCTGATCGCGACCATGCGGGTCTCACCCGGGTGCGTCGGGCTCGCTGCACCCCAGGTCGGGGTGAGTGCGAAGGTCTTCTGCGTCGACGTCTCCGAGCACCCCAAGACGCGCGGCCACCACGGCACCTTCGCGCTCTGCAACGCCGAGGTCGTCAGCGCGAGCCGCAACGAGAAGGCGCGTGAGGGCTGCATGAGCGTGCCCGACCTGACCGGCGACGTGAAGCGTGCCTCGCGGCTGGTCGTGCGCGGGCAGGAGCCCGGGACCGGCGCCGAGATCGTCCTCGAGACGGAGGCTTTCGAGGCCCGTGCTCTGCAGCACGAGATCGATCACTGCGACGGTCTGCTGTTCCTCGACCGGGTGGCCGGCGCGCACGCGCTGCACGCTCGAAAGACCTATTTGTAG
PROTEIN sequence
Length: 179
VSEDATFYGVVGKVLDVVRAPDPVLSRPGEPVDPTAPEVVQLAADLIATMRVSPGCVGLAAPQVGVSAKVFCVDVSEHPKTRGHHGTFALCNAEVVSASRNEKAREGCMSVPDLTGDVKRASRLVVRGQEPGTGAEIVLETEAFEARALQHEIDHCDGLLFLDRVAGAHALHARKTYL*