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H3-18-all-fractions_k255_1131753_8

Organism: H3-18-all-fractions_metab_conc_20

partial RP 29 / 55 MC: 6 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 2
Location: 8883..9482

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 29 subunit, SigE n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SFY9_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 195.0
  • Bit_score: 289
  • Evalue 1.60e-75
RNA polymerase sigma factor SigE similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 195.0
  • Bit_score: 289
  • Evalue 4.50e-76
RNA polymerase, sigma 29 subunit, SigE {ECO:0000313|EMBL:ABL80724.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 195.0
  • Bit_score: 289
  • Evalue 2.20e-75

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Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGAGCGCGCCCACCGCAGAACCGACGTCGGGTGCCGCGGAGAACGGCGTGCCGTCGTGGGAGCAGATCGTCGCCGACCACTCCACCCGGGTCTACCGCTTGGCCTACCGCCTGACCGGTAACCCGTACGACGCCGAGGACCTCACCCAGGAGGTCTTCGTCCGGGTGTTCCGCTCGCTGCACACCTACACGCCCGGCACCTTCGAGGGCTGGCTGCACCGGATCACCACCAACCTCTTCCTCGACCAGGCCCGGCGCAAGAGCCGGATCCGCTTCGACGCGCTTCCCGAGGACGCCGACAACCGGCTGCCGAGCCCGGTCGCGACTCCGGACGCCGCCTACCTGAACCAGATGTTCGACGCCGACGTCGAAGCCGCGCTCGCCGACCTGCCGCCGGACTTCCGCGCCGCGGTCGTGCTGTGCGACGTCGAGGGCCTGACCTACGAGGAGATCGCCGACGTCCTCGGCGTGAAGATGGGCACCGTCCGCTCGCGCATCCACCGCGGGCGTTCGATGCTGCGCAAGGCCCTGGCGCACCGTGCCCCGACCGCTGGTCGCGTCCGCGTGGCCGGGCCGCAGCTCGCCGGTCGGATCGGGTGA
PROTEIN sequence
Length: 200
MSAPTAEPTSGAAENGVPSWEQIVADHSTRVYRLAYRLTGNPYDAEDLTQEVFVRVFRSLHTYTPGTFEGWLHRITTNLFLDQARRKSRIRFDALPEDADNRLPSPVATPDAAYLNQMFDADVEAALADLPPDFRAAVVLCDVEGLTYEEIADVLGVKMGTVRSRIHRGRSMLRKALAHRAPTAGRVRVAGPQLAGRIG*