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H3-18-all-fractions_k255_6183219_9

Organism: H3-18-all-fractions_metab_conc_20

partial RP 29 / 55 MC: 6 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 2
Location: 13781..14380

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQE7_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 200.0
  • Bit_score: 292
  • Evalue 2.50e-76
RNA polymerase sigma factor SigK similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 200.0
  • Bit_score: 292
  • Evalue 7.00e-77
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 200.0
  • Bit_score: 292
  • Evalue 3.50e-76

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Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
GTGTCCCACCTCAAGCCCGTTCCGTCCGGAACACCCGAGCCGGACGGCCAGCCCGCCGCCGACCTGGGCGTGCTGCTGCGCCAGTCGGCCCGCGGCGACGAGCAGGCGTTCGCCAGCCTGTACGACGCGACCTCGGCCCGGGTGCACGGCCTGGTCCTGCGCGTGATCCGGGACCCCTCCCAAGCCGAGGAGGTCACCCAGGAGGTGTTCCTGCAGGTCTGGCGCACCGCGTCCCGCTTCGACGAGGACAAGGGCAGCCCGCTCGCCTGGCTGATGACGCTCGCCCACCGACGTGCCGTGGACCGGGTCCGCGCCGCCGAGGCCGTGAGCCGTCAGGACACCAGCTACCACCAGAACAACCACGTCGTTCCGCACGACAGCACGGCCGAGGAGGCCGAGAAGTCGATGGAGGGCCGCCGGGTGCGAGCCGCCCTGACGGAGCTCACCCCCGTCCAGCGCGAGGCCCTCGAGCTGGCGTACTTCGGCGGCTACACCCACACCGAGGTGGCCGCCATGCTCGACCTACCGGTCGGCACAGCCAAGACCCGCATCCGGGACGGACTGATCCGGATGCGCGACGCGATAGGAGTGGGCCAATGA
PROTEIN sequence
Length: 200
VSHLKPVPSGTPEPDGQPAADLGVLLRQSARGDEQAFASLYDATSARVHGLVLRVIRDPSQAEEVTQEVFLQVWRTASRFDEDKGSPLAWLMTLAHRRAVDRVRAAEAVSRQDTSYHQNNHVVPHDSTAEEAEKSMEGRRVRAALTELTPVQREALELAYFGGYTHTEVAAMLDLPVGTAKTRIRDGLIRMRDAIGVGQ*