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H3-18-all-fractions_k255_4162061_6

Organism: H3-18-all-fractions_metab_conc_20

partial RP 29 / 55 MC: 6 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 2
Location: comp(2725..3291)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6B78A similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 187.0
  • Bit_score: 254
  • Evalue 5.40e-65
putative RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 187.0
  • Bit_score: 174
  • Evalue 2.00e-41
Putative RNA polymerase ECF subfamily sigma factor {ECO:0000313|EMBL:BAN02430.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 187.0
  • Bit_score: 174
  • Evalue 9.90e-41

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Taxonomy

Ilumatobacter coccineus → Ilumatobacter → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGACGACGCGGAGCTGGCTGGCCGTTTCGCGACCGGCGACCCGGACACGATCCGAGTGCTGTACCAAACCCACGGGCGGCTGGTCTTCACGATCGCGTTCAAGGTCCTCGGCGACGCAGGCCTGGCCGAGGAGGCCACCCAGCAGACCTTCATCAAGGCCTGGCGCGGCGCCGGGAGCTACGACCCGCAACGCTCGCTGGTTGCCTGGCTGACCACGATCGCGCGCAACGCGGCGCTGGACATCTACCGCCGCGAGCGCCGCAACCGGAGCCACGCCAACATCGACTCCCCCGACCTCGGGCTGGCGACGCTGCCGCCCTCGGTCGAGCAGCTCAACGACGTGCTCGAGGTGCGCAGTGCGGTCGAGGAGCTGCCCGACGCGGACCGGGAGCTGATCCGGCTCCAGCACTACGATGAGCTGACCCACCACGAGATCGCCGAGCACCTCGCCATCCCGATCGGCACCGTGAAGTCGCGCAGCTTCCGGGCCCATCGAAGACTCGCGGGCATGCTGGGACATCTGCGCAACGACGAGTCGAGGGAGGTGAGCTCCGGTGAGTGCTGA
PROTEIN sequence
Length: 189
MDDAELAGRFATGDPDTIRVLYQTHGRLVFTIAFKVLGDAGLAEEATQQTFIKAWRGAGSYDPQRSLVAWLTTIARNAALDIYRRERRNRSHANIDSPDLGLATLPPSVEQLNDVLEVRSAVEELPDADRELIRLQHYDELTHHEIAEHLAIPIGTVKSRSFRAHRRLAGMLGHLRNDESREVSSGEC*