ggKbase home page

H3-18-all-fractions_k255_2479749_7

Organism: H3-18-all-fractions_metab_conc_4

partial RP 29 / 55 MC: 5 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(7602..8138)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 178.0
  • Bit_score: 337
  • Evalue 8.40e-90
2''''-5'''' RNA ligase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031C0577 similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 178.0
  • Bit_score: 339
  • Evalue 1.20e-90
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 178.0
  • Bit_score: 324
  • Evalue 1.50e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGCCGCGTCTGTTCACTGGACTGGAAATCCCGGCCGATATCGGCCAGACCCTTTCCAGCTTGCGTGGCGGCCTTCCCGGCGCACGCTGGATCGATCCGGAAAATTATCACGTCACCTTGCGCTTCATCGGCGACATCGACGGCGTCTCGGCGAACGAAATCGCCTCGATGCTGTTTCGGGTCAACCGCAAGCCGTTCGAGGTCAAGCTGCAGGGGCTGGCGAGCTTTGGCGGGCGCAAGCCGCGCGCCGTAGTCGCCTCCGTCGAGCCGAGCCGGCCGCTGATCGAGCTGCAGGCCGAGCTAGAGCGGCTGATGCAGCGGATCGGCCTCGATCCGGAAGGGCGCAAATTCACCCCGCATGTCACGCTGGCGCGGCTGCATGACGCCTCGAGCCAGGACGTTGCCGACTATCTCTCGGTGCGCGGCTATTTCCCGAGCCGCACGTTCCTGGCCTCGCGCTTCGTGCTGTTCTCCTCGCGTGCCTCTACCGGCGGCGGCCCGTATGTGGTCGAGGATTCCTATGCGCTGAGTGCGTAG
PROTEIN sequence
Length: 179
MPRLFTGLEIPADIGQTLSSLRGGLPGARWIDPENYHVTLRFIGDIDGVSANEIASMLFRVNRKPFEVKLQGLASFGGRKPRAVVASVEPSRPLIELQAELERLMQRIGLDPEGRKFTPHVTLARLHDASSQDVADYLSVRGYFPSRTFLASRFVLFSSRASTGGGPYVVEDSYALSA*