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H3-18-all-fractions_k255_3686488_5

Organism: H3-18-all-fractions_metab_conc_4

partial RP 29 / 55 MC: 5 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 4809..5357

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036464E6 similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 183.0
  • Bit_score: 311
  • Evalue 3.60e-82
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ERF81212.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 183.0
  • Bit_score: 310
  • Evalue 1.10e-81
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 182.0
  • Bit_score: 286
  • Evalue 3.50e-75

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCCTGTCAAAGCGTCGGATGACGATAGCCAAAAATCGCGGCGGTTTCGCGAGGCGGCGCTGCCTTACCTCGACGACGCCTACACGCTGGCGCGCTATCTCCTGCGCGATGCCGCCGACGCAGAGGACGCGGTACAAGAATGCTATCTGCGCGCGTTCAAGCACTTCGACAGCTATCGCGGGCCGGCGATGAAGCCGTGGCTATTCGCGATCCTGCGCAACGTCTGTCGCGCCGAATATGCAAGGCGCGCCACCAAGCCGACCAGCACTATCGAGGACGTACCTGAAAGCGCCGAACAGACGCCACTCTGGCACGAGGCCCAGGAGACGCCGGAGGCGCAGCTGCTGCGCGAAAAGGATTCCGACAGCATCCGCCGCCTGATATCGGCGCTCGCCGAACCGTTTCGTGAAACCTTCGTGCTGCGAGAAATTCAGAACCTTTCTTATCGCGAGATCGCCGACGTCGCCGAAGTGCCTGTTGGTACCGTGATGTCCCGTCTCGCGCGCGCCCGCGCCATGCTGCGATCGGCATGGCTGGCGGAACAGGAG
PROTEIN sequence
Length: 183
MPVKASDDDSQKSRRFREAALPYLDDAYTLARYLLRDAADAEDAVQECYLRAFKHFDSYRGPAMKPWLFAILRNVCRAEYARRATKPTSTIEDVPESAEQTPLWHEAQETPEAQLLREKDSDSIRRLISALAEPFRETFVLREIQNLSYREIADVAEVPVGTVMSRLARARAMLRSAWLAEQE