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H3-18-all-fractions_k255_4122840_3

Organism: H3-18-all-fractions_metab_conc_4

partial RP 29 / 55 MC: 5 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 2022..3131

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine synthase B; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 369.0
  • Bit_score: 647
  • Evalue 1.00e-182
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 374.0
  • Bit_score: 589
  • Evalue 3.90e-166
tRNA pseudouridine synthase B n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003784B7F similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 367.0
  • Bit_score: 637
  • Evalue 7.60e-180

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGACTGTGAGCACGGCAAACCGCGCGATCGACCAGCAAAATGCTGCATCGCGCGACGCGGAAGAAAATATTTTTTCTGAGTCCCGCAGCGATGATTCGCGTCGCAGCAACAACGATCCCCGCCATAAGCAGAAGCAGTCGAACAATCAGCCGCGCCGCGACAAGCGCGACATCCATGGCTGGGTCGTGCTCGACAAGCCGATCGGCATGACATCGACGCACGCAGTGGCCGTCCTGAAGCGCCTGTTCCAGGCGAAACGCGCAGGCCACGCCGGCACGCTCGATCCGCTGGCTTCCGGAGGCTTGCCAATCGCACTGGGTGAGGCCACCAAGACGGTTCCGTTCGTGATGGATGGCCGCAAGCGCTATCGCTTCACCGTCTCCTGGGGCGAGGAACGTGATACCGACGACACCGAAGGCCGCGTCGTCAGGACCAGCGAACTGCGGCCCGCGGCCGACACGATCCGGGCGCTGCTGCCGCAGTTCACCGGCCTGATCGAGCAGATTCCGCCGCAATATTCCGCGATCAAGGTTCAGGGCGAGCGCGCCTATGACTTGGCGCGGGACGGCGAAACCGTCGAATTGCAGCCGCGGCCAGTCGAGATCCACGAATTAACCTTGGTGGAACATACCGATAGCGGCCCATCTGTGTTCGAGGCCGAATGCGGCAAGGGAACCTATGTTCGCGCTTTGGCCCGCGATATCGGCCGAATTCTAGGCTGTTTCGGCCATATCTCCGCGTTGCGGCGGACCCTGGTCGGTCCGTTTGGCGAAGCGGACATGATTCCGCTGGAACAGTTGGAGGCTTTGTGCAATAGAGCCGCGTCTGGCGAGGGAAGCCTCGCCGACGCGCTTTTGCCCGTTGAGACCGCGCTGGACGACATCCCGGCACTGGCCGTCACACGGGCTGATGCGGCAAGGCTCCACAGGGGCCAGGCCGTTTTGTTGCGCGGACGGGATGCGCCCAATTGTAGCGGCACAGTCTATGTCACGGTGGCAGGCCGGCTTCTGGCCCTCGCCGAAATTGGCAATGGCGAACTCATCCCCAAGCGCGTGTTCAACCTGACCGGACTGACTGCCAGTCCGGCTCGCAGCAATGAAAGAGTTTGA
PROTEIN sequence
Length: 370
MTVSTANRAIDQQNAASRDAEENIFSESRSDDSRRSNNDPRHKQKQSNNQPRRDKRDIHGWVVLDKPIGMTSTHAVAVLKRLFQAKRAGHAGTLDPLASGGLPIALGEATKTVPFVMDGRKRYRFTVSWGEERDTDDTEGRVVRTSELRPAADTIRALLPQFTGLIEQIPPQYSAIKVQGERAYDLARDGETVELQPRPVEIHELTLVEHTDSGPSVFEAECGKGTYVRALARDIGRILGCFGHISALRRTLVGPFGEADMIPLEQLEALCNRAASGEGSLADALLPVETALDDIPALAVTRADAARLHRGQAVLLRGRDAPNCSGTVYVTVAGRLLALAEIGNGELIPKRVFNLTGLTASPARSNERV*