ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

H3-18-all-fractions_k255_1519922_15

Organism: H3-18-all-fractions_metab_conc_4

partial RP 29 / 55 MC: 5 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 8593..9669

Top 3 Functional Annotations

Value Algorithm Source
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15) similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 359.0
  • Bit_score: 656
  • Evalue 3.30e-186
FAD-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003656524 similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 359.0
  • Bit_score: 663
  • Evalue 9.60e-188
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:ERF80368.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 359.0
  • Bit_score: 660
  • Evalue 8.70e-187

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGGCCATCATGATGCCCGCTTCCGATCAGGCGGTTCTGGATCGTCGCAGCGACGTCGTCGCCGCCCTGCGCGCGATTGTGCCGGGCGAAGGGGTGATCGATACGCCAGCCCAAATGCTGGCTTACGAGTCCGACGGGCTGACCGCGTATCGCCAGCCACCAATGGTCGTGGTGCTGCCCGATACCACCGCGCAGGTCTCAAAGGTGCTGAAGTATTGCTTCGAGCACGGCATCAAGGTCGTCCCGCGCGGCTCCGGTACTTCCTTGTCCGGCGGCGCGTTGCCGCTGGCCGACGGCGTGCTGCTGGGGCTCGGCAAGTTCAAGCGCATCCGCGAGATCGATTTTGACAACCGCGTGGTGGTGACGGAACCCGGCGTCACCAATCTCGCCATCAGCCAGGCGGTGGCGCATGCGGGCTTTTATTACGCGCCCGATCCGTCGTCGCAGATCGCCTGCTCGATCGGCGGCAATGTCGCGGAAAATTCCGGCGGCGTGCACTGCCTGAAATACGGCATGACCACCAACAACGTGCTCGGCTGCGAGATCGTGCTGATGAACGGCGAGATCATCCGCATCGGCGGCAAATCCGCGGAAAATAGCGGCTACGATCTGATGGGCATCATCACCGGCTCCGAAGGGCTGCTCGGCGTCATCACCGAGATCACGGTGCGGATCCTGCAGAAGCCGGAGACGGCGCGGGCGCTGATGGTCGGCTTCGCAGAAGTCGAGGCCGCCGGCCAATGCGTGGCTGAAATCATCGGCGCCGGCATCATCCCGGGCGGCATGGAGATGATGGACAAGCCTGCGATCCACGCCGCGGAAGCCTTTGTCCATGCCGGCTACCCGCTCGATGTGGAGGCACTGCTGATCATCGAACTCGACGGCCCGGGCGTGGAGGTCGACGAGCTGATCCGGCGGGTCGAGGCGATCGCGCAACGCTGCGGCTCGACGACGTGCCAGATCTCCAACTCCGAGACCGAACGCAATCTGTTCTGGGCCGGCCGCAAGGCCGCCTTCCCGGCGGTCGGCCGGATTTCGCCGGACTATCTCTGCATGGACGGCACCATTCCGCGCGGG
PROTEIN sequence
Length: 359
MAIMMPASDQAVLDRRSDVVAALRAIVPGEGVIDTPAQMLAYESDGLTAYRQPPMVVVLPDTTAQVSKVLKYCFEHGIKVVPRGSGTSLSGGALPLADGVLLGLGKFKRIREIDFDNRVVVTEPGVTNLAISQAVAHAGFYYAPDPSSQIACSIGGNVAENSGGVHCLKYGMTTNNVLGCEIVLMNGEIIRIGGKSAENSGYDLMGIITGSEGLLGVITEITVRILQKPETARALMVGFAEVEAAGQCVAEIIGAGIIPGGMEMMDKPAIHAAEAFVHAGYPLDVEALLIIELDGPGVEVDELIRRVEAIAQRCGSTTCQISNSETERNLFWAGRKAAFPAVGRISPDYLCMDGTIPRG