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H3-18-all-fractions_k255_2232597_14

Organism: H3-18-all-fractions_metab_conc_4

partial RP 29 / 55 MC: 5 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(9796..10344)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W3V7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 182.0
  • Bit_score: 344
  • Evalue 6.50e-92
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 182.0
  • Bit_score: 344
  • Evalue 9.10e-92
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 182.0
  • Bit_score: 341
  • Evalue 9.20e-92

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCCTCTCACCAACCAACTTCGCGACGACATCTTGGCGTCGGTACCTAGCCTGCGCGCGTTCGCGATCTCGCTGAGCGGTAACGGCGATCGTGCCGACGATTTGGTCCAGGAGACGTTGTTGCGGGCGATTGCCAACATCGACTCATTCCAGCCCGGCTCGAACCTGCCGGCCTGGCTGTTCACCATCTTGCGCAACCTGTTTCGCTCCGACTATCGGAAGCGGCGGCGCGAGGTTGAGGACGCCGAGGGCAATTATGCCAAGACACTGAAGACCCAGCCGGCGCAAAATGCGCACCTTGAATTCGAGGAGTTTCGCGCGGCGCTCGACAAGCTGCCGCAGGACCAGCGTGAAGCCCTGATCCTGGTCGGCGCATCCGGCTTTTCCTATGAGGATGCGGCTTCGATCTGCGGCTGCGCGGTCGGCACCATCAAGAGCCGCGTCAACCGCGCGCGATCAAAACTCTCTGCGCTGCTCTATGTCGAGGGCGCGGAGGATTTCGGCCCCGATGACACCGTGCGCGCCGTGATCGGCGGCAATGGCGGTTGA
PROTEIN sequence
Length: 183
MPLTNQLRDDILASVPSLRAFAISLSGNGDRADDLVQETLLRAIANIDSFQPGSNLPAWLFTILRNLFRSDYRKRRREVEDAEGNYAKTLKTQPAQNAHLEFEEFRAALDKLPQDQREALILVGASGFSYEDAASICGCAVGTIKSRVNRARSKLSALLYVEGAEDFGPDDTVRAVIGGNGG*