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H3-18-all-fractions_k255_6562766_21

Organism: H3-18-all-fractions_metab_conc_6

near complete RP 50 / 55 BSCG 50 / 51 MC: 3 ASCG 14 / 38
Location: 21008..21598

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1U3_CORCM similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 175.0
  • Bit_score: 165
  • Evalue 4.50e-38
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 186.0
  • Bit_score: 204
  • Evalue 1.20e-49
sigK; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 175.0
  • Bit_score: 165
  • Evalue 1.30e-38

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 591
TTGTCACTGTCGAATCCACAGACGGACGCGGAGGAGGCTGAACTGCTGCGCGCGTTGGCGCGCGGCGACGAGTCTGCGTTCGCGCGCATATACGACCGCTACAGCCCCATCCTTTTGGGACTCCTGCTCCGTATATTACGCAGCCGGGCCGAGGCGGAGGACGTTCTGCAAGAGGTCTTCCTCCAAGTCTGGCAGCGCGCGCACTCGTTCGACCCGGAGCGCGGGCGCGCATTCACATGGCTCGTCACGCTGGCGCGAAGCCGCGCGATAGACCGCCTGCGCTCGGTCGGCTCGCGCGAGCGCGCGGCGCTACGCTCGGCGGAAGAGGCGCCGCCCGAGTCGGAGCCGACGGAGTGGGCGGACAACGCGGCGATACGCTCCGAGCGCGCCGAGGCAGTGCGCGCGGCGCTCGCCGAGTTGCCCGAGGAGCAGAGGCAGGTGCTTATGCTCGCGTACATCGAAGGCATGTCCCAGTCGGAGATTGCCGCGGCGAAGAACCAGCCGCTCGGGACTGTGAAGACGCGGACGCGCTCCGCGCTCAGGAAGCTCAGCGATTCTCTGCGCACGAGGCTCGGGCAGAGCGTCGCTTGA
PROTEIN sequence
Length: 197
LSLSNPQTDAEEAELLRALARGDESAFARIYDRYSPILLGLLLRILRSRAEAEDVLQEVFLQVWQRAHSFDPERGRAFTWLVTLARSRAIDRLRSVGSRERAALRSAEEAPPESEPTEWADNAAIRSERAEAVRAALAELPEEQRQVLMLAYIEGMSQSEIAAAKNQPLGTVKTRTRSALRKLSDSLRTRLGQSVA*