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H3-18-all-fractions_k255_1447790_9

Organism: H3-18-all-fractions_metab_conc_6

near complete RP 50 / 55 BSCG 50 / 51 MC: 3 ASCG 14 / 38
Location: comp(11466..12029)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVZ3_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 185.0
  • Bit_score: 204
  • Evalue 6.30e-50
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 185.0
  • Bit_score: 204
  • Evalue 1.80e-50
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY14127.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 185.0
  • Bit_score: 204
  • Evalue 8.90e-50

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Taxonomy

Haliangium ochraceum → Haliangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGCCGGAATCGCCTTCCCCAGAAGTGACGCAGTTGCTTGCCGCCTGGAGCGACGGAGATCAGTCGGCGCTCGATAAACTCCTGCCTTTGGTCGAGAGTGAACTGCGCCGGCTCGCCCATCGCTACATGAGCCACGAGCGCCAGAACCACACCCTCCAGACGACCGCGCTGGTTAATGAGGCTTATTTGAAGCTCTTCGATCAGCAGGTGGGTTGGCAAAATCGGGCTCATTTCTTCGGCATCGCCGCGCAGGTCATGCGGCGCATCCTGATCGACCACGCTCGCCAACATCTGGGCCCGAGACGCGGCGGCGGGAAGGTCATCTCGCTGGACGAGGGGGCAGTAATTAGCGACGAACGCGCGTCCGAGTTAGTGGCCCTCGACGAAGCGCTGACGACACTCGCGAAAGTTGACGGGCGAAAGGTTCGGGTGGTGGAACTGCGTTACTTCGGGGGGTTGAGTGTGGAAGAGACCGCTTCCGTCTTAGGCGTCTCCGGCGAAACGATCAGGCGTGAGTGGGTACGCGCCAAAGCGTTTCTACAACGCGAGATGAGTCGGGATTGA
PROTEIN sequence
Length: 188
MPESPSPEVTQLLAAWSDGDQSALDKLLPLVESELRRLAHRYMSHERQNHTLQTTALVNEAYLKLFDQQVGWQNRAHFFGIAAQVMRRILIDHARQHLGPRRGGGKVISLDEGAVISDERASELVALDEALTTLAKVDGRKVRVVELRYFGGLSVEETASVLGVSGETIRREWVRAKAFLQREMSRD*