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H3-18-all-fractions_k255_1741415_13

Organism: H3-18-all-fractions_metab_conc_6

near complete RP 50 / 55 BSCG 50 / 51 MC: 3 ASCG 14 / 38
Location: 18166..19530

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:CDM64330.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 434.0
  • Bit_score: 419
  • Evalue 4.30e-114
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB id=12556442 bin=CNBR_ACIDO species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 413.0
  • Bit_score: 283
  • Evalue 2.00e-73
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 411.0
  • Bit_score: 206
  • Evalue 8.80e-51

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
ATGGAAGAGACGCCCGACTCAGTTGTCGAGACACGCGACGAGATTGTCGAGACAAACGGCGGCGCTGTCGTCGAGAAGCGCGCCGTGCTCACGTCTGTGACGAAGCCGCCCCGACGACCGAACAGGACTGCTCTCATCACGGTCGCTCTCTTCGCGGCGGCCGTGCTTGCGCTCCTGCTCTGGTGGCTCGCACGAGACCGCGGCGAAGCGGGCCGCGTCGTGACGGCTCCGCGCTCCGTCACATTCGGCCAGCCGGACGCGGGCGCGGGCAATACGACAGCGCAAGCGTCCGAGGCGACGCTCACGGTTAACTCGGACGTGGCCGCACGCGCGGGTGTGAAGATCGAAGCCGTCGGCGAACAACTCGCGCCCGAGGCCGCGTCGCAGACGGCGTCGGGCGTCGTGCAGGCGAACGCGTACCGCTCGACGCCCGTCGTCTCGCTCGTCGGCGGTCGCGTGACGAGCGTCGCGGCCGAGGCGGGGCAGTTCGTAAAGCGTGGGCAGACCGTCGCCGTAGTCTTCAGCGACGAGCTTGCGTCGGCGCAGTCGAAATACCTCTCGGCGCAGGCCGAACTTGAAGAGCATCACAAGCACCATCACCGCACGGCCGAGCTTGTCGAGATAGGCGCGGTGAGCCGGGAGGAGTTCGAGCAGTCGGCCTCGATGTTGAAGAAGGCCGAGGCTGAGCTTGCGTCACAGCGTCAGCGTCTTCTGCTGCTCGGCCTCGCGCCGCAACGCGTCGAAGCGTTGCAGTCGTCGTCGCAGATAAGCTCCGAGATAGCGCTCACGGCGCCGGTCTCGGGCACGGTCGTCAGCCGCGCGGTCAACCCCGGCGAGGTCGTCGAGGCTAACAGAGAATTGCTGCGCGTCGCAGACCTATCGAACGTCTGGGTCGTCGCGCAGGTCTTCGAGCGTGACCTCGCGCGCGTCCGTATGGGCAGCGGCGCGAGCGTGACGAGCGAAGCATATCCGGGCCGCGTCTTCCGTGGACGGGTCGCCTTCGTAGACCCGCAGCTTGACGCCTCGACGCGAACGGCGCAGGTGCGCGTCGAGATAGCTAATCCGGCGCAGGCGCTCAAGCTCGGCATGTTCGTCGGCGTCGCCTTCGGCGCACTCGGCACTGCCGAAGCGACCGCGCCGACCGTCCCCGCCTCGGCCGTGCAGAACATAGGCGGGCGCGCGTTCGTCTTCCTCGCCACGAATGACGCGAACACATATGTCGTGCGAGCCGTGCGCCTCGGCGCGGAAGTTAATGGGCGCTTCCCCGTCGTCGAAGGTCTCGCCGTCGGCGACCGCGTCGTGACCGAAGGCAGCTTCATGCTCCGCGCCGAGTGGCTCAAGCTTCACCCCGAGGGCGGACACTAA
PROTEIN sequence
Length: 455
MEETPDSVVETRDEIVETNGGAVVEKRAVLTSVTKPPRRPNRTALITVALFAAAVLALLLWWLARDRGEAGRVVTAPRSVTFGQPDAGAGNTTAQASEATLTVNSDVAARAGVKIEAVGEQLAPEAASQTASGVVQANAYRSTPVVSLVGGRVTSVAAEAGQFVKRGQTVAVVFSDELASAQSKYLSAQAELEEHHKHHHRTAELVEIGAVSREEFEQSASMLKKAEAELASQRQRLLLLGLAPQRVEALQSSSQISSEIALTAPVSGTVVSRAVNPGEVVEANRELLRVADLSNVWVVAQVFERDLARVRMGSGASVTSEAYPGRVFRGRVAFVDPQLDASTRTAQVRVEIANPAQALKLGMFVGVAFGALGTAEATAPTVPASAVQNIGGRAFVFLATNDANTYVVRAVRLGAEVNGRFPVVEGLAVGDRVVTEGSFMLRAEWLKLHPEGGH*