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H3-18-all-fractions_k255_3215288_16

Organism: H3-18-all-fractions_metab_conc_6

near complete RP 50 / 55 BSCG 50 / 51 MC: 3 ASCG 14 / 38
Location: comp(19363..19944)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMD0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 168.0
  • Bit_score: 137
  • Evalue 7.50e-30
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF58972.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 168.0
  • Bit_score: 137
  • Evalue 1.10e-29
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 161.0
  • Bit_score: 119
  • Evalue 1.00e-24

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 582
ATGCGGCGACACGGCCCGAGGGTCTTCCGCACGGCCTCGCGCTTCTTCCGTCGGCGCGAGCAGGTCGAGGAGGCCGCGCAGGAGATTTTCCTGAAGGTCTTCACGCAGCTCGACACCTATGAGGCGCGCGGCTCCTTTGAAGGGTGGCTGACGCGCATCGCCACGAACACATGCCTCAACCTCCTGCGAAGCGCGCGACGCAGGCCCGAGCTTGCGGCCTCGGATTTGTCGGAAGACGAGGGCGCGTGGCTCGAAGAGAAGATGGCGGGCGCGGCTGCCGAGCGACAGAAGGCGGCAGAGCGCGGGATGGTCGCGGCGGATTTAGCCGGGCGAGTGCTTGAGACGATGTCGCCGGACGACCGCGTGGTGCTGATGTTGATGGACGGCGAGGAGGCTTCGGTCAAAGAGGTCTCGCAGGCGACGGGCTGGAGCGAGTCGAACGTGAAGGTCAGGGCGATGCGCGCGAGAAAGAGAATGCGCGAGGCGGTCGAGAAATTGTTGTCGCGCGGGGCGAAGAGCGCCGAACGCGGGTTGGTAGGCGCGGGCGGTTACGAGAGTTCTGAAAGCGAGGATGGGCGATGA
PROTEIN sequence
Length: 194
MRRHGPRVFRTASRFFRRREQVEEAAQEIFLKVFTQLDTYEARGSFEGWLTRIATNTCLNLLRSARRRPELAASDLSEDEGAWLEEKMAGAAAERQKAAERGMVAADLAGRVLETMSPDDRVVLMLMDGEEASVKEVSQATGWSESNVKVRAMRARKRMREAVEKLLSRGAKSAERGLVGAGGYESSESEDGR*