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H3-18-all-fractions_k255_2921403_5

Organism: H3-18-all-fractions_metab_conc_6

near complete RP 50 / 55 BSCG 50 / 51 MC: 3 ASCG 14 / 38
Location: 4096..5796

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037CC229 similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 570.0
  • Bit_score: 560
  • Evalue 1.10e-156
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 561.0
  • Bit_score: 763
  • Evalue 2.00e-217
rpoD; RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 562.0
  • Bit_score: 557
  • Evalue 2.50e-156

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1701
ATGAAGAAGCAGGGGCTCGGGCTTTTGGAGCCTACCGGGGAAAAATTTTTCGAGGGCTACGGCGAGGTCGTCGCCGGCGACACGGGCTCCGAGCACAGCATTGACGATGTGCTCCAGAAGCTCGAAGCCGCGACCATCGGCGGAGTCGAATCGGACGAAGAACTCATTTCGGAGGTCGCGTCGCTCGCGACGGACGTTGAGGACGAAGGCACTCTCGACGACGTTGACGAGCTAGACCTTTCCGCGGGCGAGGACGAGAAGTCGGCCGACCCCGTGCGCGTGTACCTGCGTCAGATGGGCACCGTGCCGCTGCTGACGCGCGAGCAGGAGGTCGCAATCTCGCAGCGCATCGAGCGCGGCCAGATAAAGACGCATAAGGCGATCTCGCGCTCGCCCATCGCCGTCAAGGAACTCATTCGCATCGGCGAGGGGTTGGAGGCGGGCCGCCTAAGCATACGCGACGTGGTCAACTTCTCCGACCAGGCCGACGTGTCCGAGGCCGAGGATAAGGCCGACGAGTACTTACAGTGGACGCTCGAAGGAATCGAGAACATACGCAAGCACTTCAAAGAGGGCTTGAAGGAGTGGGAGAAGTTCTCGGCTGAGTACAAGCTCACGCGCGGCAAGCAGTCGAAGAAGCTCCTACGTCTGCGCCGAAAGGTCGCGCGCACGAGGCTCGAAATCTCGCAGGAGATGAAGAACCTCAACATGAAGGAGTCCGCGCGCCATCGTCTGATTGACGCCATCGCGCGCGCTCACAGAGAGGTGCGCGTCGAAGAGCGCGAGATAAAGAAGCTCGGCGACAAGTTGGAGAACAAGCGCATCAAGCCCGAGGTCGAGAAGGAGTTGAAGCGCCAGTTGAGCGCCGCGCGCCGACGCCTCAGGAAGGTCGAAGAGGATCACGCAATCTCGGCCGTCGAGATAAAGCGCACGCATCAATCAATCGTCGCGGGCGAGGCGGAGACGCAGGAGGCCAAGCGCGAGTTGACCGAAGCGAACCTTCGGCTCGTCGTCTCCATCGCGAAGAAGTACACGAATCGCGGCCTACAGTTCCTCGACCTGATTCAGGAAGGGAACATCGGCCTGATGAAGGCCGTGGACAAGTTCGAGTGGAGGCGCGGCTACAAGTTCTCGACCTACGCGACGTGGTGGATTCGTCAGGCTGTGACGCGCGCGATTGCCGACCAGGCTCGGACGATTCGCATACCCGTCCACATGATCGAGACCATCAACAAGCTCATACGCACCAGCCGCGCGCTCGTGCAGGAGTTGGGCCGCGAGCCTACGACCGAGGAGATTGCGTCGAAGGTTGACATGCCTGTGTCTAAGGTTCGCAGCGTCTTCAAGCTGGCGCAGCAGCCCATCTCACTTGAGACGCCGATTGGTGAGGAGGAGGATTCGCACCTCGGCGACTTCATCGAGGACAAGTCACGCATAAGCCCGGCCGACTCGGTCGTGACGACGAACCTCCGGCAGGTGACCGACGCCGTGCTCGCTACTTTGAGCCCGCGCGAGGAGGTCGTCATCAAGCTTCGTTACGGCCTCGGCCCGCAGGGCGAGGAGCACACGCTCGAAGAGGTAGGCAAGAACTTCGACGTGACGCGCGAGCGCATACGACAGATTGAGGCGAAGGCGCTTCGCAAGCTCCGCCACCCTTCGCGCGCGCGCCTGCTCAAGGCGTTCACCGAAGGCTTGCAGTAG
PROTEIN sequence
Length: 567
MKKQGLGLLEPTGEKFFEGYGEVVAGDTGSEHSIDDVLQKLEAATIGGVESDEELISEVASLATDVEDEGTLDDVDELDLSAGEDEKSADPVRVYLRQMGTVPLLTREQEVAISQRIERGQIKTHKAISRSPIAVKELIRIGEGLEAGRLSIRDVVNFSDQADVSEAEDKADEYLQWTLEGIENIRKHFKEGLKEWEKFSAEYKLTRGKQSKKLLRLRRKVARTRLEISQEMKNLNMKESARHRLIDAIARAHREVRVEEREIKKLGDKLENKRIKPEVEKELKRQLSAARRRLRKVEEDHAISAVEIKRTHQSIVAGEAETQEAKRELTEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEWRRGYKFSTYATWWIRQAVTRAIADQARTIRIPVHMIETINKLIRTSRALVQELGREPTTEEIASKVDMPVSKVRSVFKLAQQPISLETPIGEEEDSHLGDFIEDKSRISPADSVVTTNLRQVTDAVLATLSPREEVVIKLRYGLGPQGEEHTLEEVGKNFDVTRERIRQIEAKALRKLRHPSRARLLKAFTEGLQ*