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H3-18-all-fractions_k255_4948002_6

Organism: H3-18-all-fractions_metab_conc_6

near complete RP 50 / 55 BSCG 50 / 51 MC: 3 ASCG 14 / 38
Location: comp(7659..9131)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CDM64924.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 470.0
  • Bit_score: 627
  • Evalue 1.50e-176
Fis family two component sigma54 specific transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX id=12557333 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 457.0
  • Bit_score: 455
  • Evalue 4.10e-125
two component sigma54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 466.0
  • Bit_score: 379
  • Evalue 1.40e-102

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1473
ATGCAGGCCGCAACCTTACCGCGGTCGGTTCCGAGCCTCAGCTTTATGGATGTCAAAATCTTATTCGTCGAAGACGACGACCGCCTGCGGGACGTGCTCCTTGAGGCGGCGGCGATGGAGGAGTACGAAGCGCGCGGAGTATCTACCGCCGAGGCCGCGGTCGATCTTCTGCGGGCCGAGTCCTTCGACGTTCTGGTCACGGACGTAACGCTGCCCGGCATGTCCGGGCTCGAACTGCTGCCGTATTGCGCGCGCCTGCGGCCCGGCATCCTGCCCATCGTCATCACCGCATACGGCACGGTTGACATCGCCGTCGAGGCGATGAAGCGTGGCGCGACGGACTTCATCACGAAGCCTTTCGAGTTGGACGGGCTGCTCGGGACGATTCGCGTCGCGGCCGAACGCGCGACGCGGACTCGCGTCGTCACGCGGGGCGGCGCGAGTCAGGGAACAGGGAACCTCGTCGCGGCCGCGCCGTCGATGCAGAGGCTACTCGAACAGGTGAGGGCCATCGCGCCGTTCCAGACGACGGTGCTGGTGACGGGCGAGACGGGGACGGGCAAGGAGATGGTCGCGCGCGCCATACACAACCTCAGCCCGCGTAGCGAGAGGGCGCTCGTCGCTCTCAACTGCGCCGCCGTCCCCGAACAGTTGCTTGAGGACGAGTTGTTCGGCCACGTGAAGGGAGCCTTCACGGGCGCGCAATCCGCGCGAGACGGGCGCTTTGAGCAGGCGGACGGCGGTACGCTCTTCCTCGACGAGATAGGCGACATGAGCCTGCCGCTTCAGTCAAAGCTCCTGCGCGTCCTTCAGGAGCGCGAGTTTGAGAAGCTCGGTTCGTCGCGCACAGTCAAGGTGGACGTGCGCGTCGTGGCCGCTACCAGCGCAGACCTACAGAGGCGCATTGACGAGGGCACGTTCCGCCCAGACCTTTATTACCGGCTGAACGTCGTCCACCTGCGCCTGCCGCCTCTGCGCGAGCGGCGCGAGGACATACGCCCTCTCGCTGAACACCTGCTGGCGAAGTTCTGCGCGGGCGTGGGGCTACCCGCGAAGAGTATCTCCGAAGAGGTGTGGAACGCCTTCGCCTCATACCGCTGGCCGGGTAACGTGCGGCAGCTACAGAACGCGGTAGAGCGCGCGGCGGTGCTGACGGGCGCGGGCGTCGAAATCCACCTTCAAGACCTGCCGGAGGAGGTGCGCGCGGCGGCGGCGGCGGCCGAGGGCCAGCACGGCGCCGTCGGGATGAAGCCGGAGCGACGGCCGCCCGACATTCCCGACGACGGAGTCAACTTCGACGCGGTCGTCACGAAGGTCGAGCGCGACCTGCTGTTGCAGTCGCTCGCGAAGTCGGGCGGCAACAAGATGCGCGCCGCGCAACTGCTCGGCATGAAGCGCACGACCTTCGTCGAGAAGCTGAAGCGTCTCGGGATCGAGTGGGAGAAGGAGACGCCCGACACAGGGCGGGAGTAA
PROTEIN sequence
Length: 491
MQAATLPRSVPSLSFMDVKILFVEDDDRLRDVLLEAAAMEEYEARGVSTAEAAVDLLRAESFDVLVTDVTLPGMSGLELLPYCARLRPGILPIVITAYGTVDIAVEAMKRGATDFITKPFELDGLLGTIRVAAERATRTRVVTRGGASQGTGNLVAAAPSMQRLLEQVRAIAPFQTTVLVTGETGTGKEMVARAIHNLSPRSERALVALNCAAVPEQLLEDELFGHVKGAFTGAQSARDGRFEQADGGTLFLDEIGDMSLPLQSKLLRVLQEREFEKLGSSRTVKVDVRVVAATSADLQRRIDEGTFRPDLYYRLNVVHLRLPPLRERREDIRPLAEHLLAKFCAGVGLPAKSISEEVWNAFASYRWPGNVRQLQNAVERAAVLTGAGVEIHLQDLPEEVRAAAAAAEGQHGAVGMKPERRPPDIPDDGVNFDAVVTKVERDLLLQSLAKSGGNKMRAAQLLGMKRTTFVEKLKRLGIEWEKETPDTGRE*