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H3-18-all-fractions_k255_5552561

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_5552561_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2..1930)
DNA (1929bp) protein (643aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAV4_GEMAT
TonB-dependent outer membrane protein, SusC/RagA
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG89359.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5552561_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2090..4885)
DNA (2796bp) protein (932aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E4_GEMAT
TonB-dependent outer membrane protein, SusC/RagA
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG90170.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5552561_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(5060..5389)
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
H3-18-all-fractions_k255_5552561_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5382..6128)
DNA (747bp) protein (249aa)
RNA polymerase sigma factor RpoE n=1 Tax=Nocardiopsis xinjiangensis RepID=UPI000362285D
RNA polymerase sigma factor
Tax=GWC2_Gemmatimonadetes_71_10_curated
H3-18-all-fractions_k255_5552561_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6523..7770
DNA (1248bp) protein (416aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CWG3_MYXXD
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AHG87827.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5552561_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7923..8702
DNA (780bp) protein (260aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC93_GEMAT
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG87826.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5552561_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8768..11191
DNA (2424bp) protein (808aa)
Gll1201 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLC5_GLOVI
permease
Permease {ECO:0000313|EMBL:AHG87819.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5552561_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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11273..13693
DNA (2421bp) protein (807aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SG7_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
H3-18-all-fractions_k255_5552561_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13752..16160
DNA (2409bp) protein (803aa)
Gll2427 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHV8_GLOVI
permease
Permease {ECO:0000313|EMBL:AHG93894.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5552561_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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16338..17039
DNA (702bp) protein (234aa)
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG87821.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC transporter-like protein id=12555671 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
H3-18-all-fractions_k255_5552561_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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17089..18462
DNA (1374bp) protein (458aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CNN0_MYXFH
sigma-54 dependent DNA-binding response regulator
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
H3-18-all-fractions_k255_5552561_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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18478..19878
DNA (1401bp) protein (467aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXY3_OPITP
multi-sensor signal transduction histidine kinase
H3-18-all-fractions_k255_5552561_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19982..21037)
DNA (1056bp) protein (352aa)
protein of unknown function DUF4098
Uncharacterized protein {ECO:0000313|EMBL:AHG92024.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=24542156 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
H3-18-all-fractions_k255_5552561_14
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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21253..21609
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P361_9ACTO
MerR family transcriptional regulator {ECO:0000313|EMBL:ETK35410.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
MerR family transcriptional regulator
H3-18-all-fractions_k255_5552561_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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21665..21991
DNA (327bp) protein (109aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T2_GEMAT
trxA; thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-18-all-fractions_k255_5552561_16
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22125..22577)
DNA (453bp) protein (151aa)
Putative uncharacterized protein id=2416628 bin=GWA2_Ignavibacteriae_54_16_partial species=Magnetospirillum magneticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
H3-18-all-fractions_k255_5552561_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22746..23396
DNA (651bp) protein (217aa)
Pyridoxal 5'-phosphate synthase {ECO:0000256|SAAS:SAAS00025317}; EC=1.4.3.5 {ECO:0000256|SAAS:SAAS00025317};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GV39_9CYAN
Pyridoxine/pyridoxamine 5'-phosphate oxidase
H3-18-all-fractions_k255_5552561_18
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(23468..24553)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003819CC5
nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein
Uncharacterized protein {ECO:0000313|EMBL:CEA09319.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
H3-18-all-fractions_k255_5552561_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24694..26628)
DNA (1935bp) protein (645aa)
Sensory transducer methyl-acccepting chemotaxis protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DQB2_9RHIZ
Sphingomonas taxi strain 30a NODE_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30139.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
methyl-accepting chemotaxis sensory transducer
H3-18-all-fractions_k255_5552561_20
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26659..27099)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKD7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAF01855.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
phosphate ABC transporter substrate-binding protein
H3-18-all-fractions_k255_5552561_21
bacterium UASB270, Bacteria

Not on your lists

comp(27112..28320)
DNA (1209bp) protein (403aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK58843.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
H3-18-all-fractions_k255_5552561_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

28673..29026
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C76C0
UPF0145 protein ybjQ
UPF0145 protein J421_1900 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5552561_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(29082..30842)
DNA (1761bp) protein (587aa)
Peptidase M61 domain protein n=2 Tax=Chloroflexus RepID=A9WIA1_CHLAA
Predicted protease with the C-terminal PDZ domain {ECO:0000313|EMBL:CDM66894.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M61 domain-containing protein
H3-18-all-fractions_k255_5552561_24
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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30973..31935
DNA (963bp) protein (321aa)
CheB methylesterase (EC:3.1.1.61)
CheB methylesterase {ECO:0000313|EMBL:ACK69639.1}; EC=3.1.1.61 {ECO:0000313|EMBL:ACK69639.1};; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
CheB methylesterase n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7K771_CYAP7
Displaying 24 items

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