ggKbase home page

S1-16-all-fractions_k255_245977_7

Organism: S1-16-all-fractions_metab_10

partial RP 21 / 55 MC: 4 BSCG 26 / 51 MC: 4 ASCG 11 / 38 MC: 3
Location: comp(6878..7438)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 177.0
  • Bit_score: 209
  • Evalue 2.00e-51
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 184.0
  • Bit_score: 242
  • Evalue 5.90e-62
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 184.0
  • Bit_score: 242
  • Evalue 2.90e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGCCGGTGGCAGCACTCGAACCGCACCGCCTGACGCCCTCGCTGGACCCGAACGCCGACGTGGCCCTGGCCGCGGCGGGCGACCGGGGTGCCTTCGAGCGCCTCTACCGGGCGAACGCGGACCGCGTCTTCTCCCTCTGCGCCCGCATGGTCGGCGACCGCGGACGCGCGGAGGAGCTCGTGCAGGACGTGTTCGTGCGCGCCTGGGAGAAGCTCCACCTCTACCGCGGCGAGAGCGCGTTCTCGACCTGGCTGCACCGGCTGGCGGTCAACGTGGTGCTCAACGAGCGCAAGACCGACGGACGGGGCCGCAAGCGCGACGGCGGTGGGGATGAGGTGGTGGACACGCTCCCCTCGCTGCCCACCGCGCCGGGCGACCGGATGGACCTCGAGGCGGCCATCGCCAAGCTCCCCCCGGGAGCGCGGCGGGTGTTCCTCCTCCACGACGTGGAAGGCTACAAGCACGAGGAGATCGCCGAGATGCTGGGCGTCACCTCGGGTGGGAGCAAGGCGCAGCTCCACCGCGCCCGGATGCTCCTCAGGGAGGCACTGAACCGATGA
PROTEIN sequence
Length: 187
MPVAALEPHRLTPSLDPNADVALAAAGDRGAFERLYRANADRVFSLCARMVGDRGRAEELVQDVFVRAWEKLHLYRGESAFSTWLHRLAVNVVLNERKTDGRGRKRDGGGDEVVDTLPSLPTAPGDRMDLEAAIAKLPPGARRVFLLHDVEGYKHEEIAEMLGVTSGGSKAQLHRARMLLREALNR*