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S1-16-all-fractions_k255_4568319_3

Organism: S1-16-all-fractions_metab_10

partial RP 21 / 55 MC: 4 BSCG 26 / 51 MC: 4 ASCG 11 / 38 MC: 3
Location: comp(1413..2300)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 295.0
  • Bit_score: 553
  • Evalue 1.10e-154
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 295.0
  • Bit_score: 553
  • Evalue 3.20e-155
RNA polymerase sigma factor {ECO:0000313|EMBL:BAH37752.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 295.0
  • Bit_score: 553
  • Evalue 1.60e-154

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 888
ATGACGGAAGTCAAGCGCCGCCGCCGCCGCGCGGCCCCGGCGGGCATCGCTCCGAACGAGCCCGAGCGCGACATCCTTGACCAGTATCTCTACGAAGTGAGCACGTACCCCCTCCTGAAGCCGGTGGAGGAGATCGAGCTCGCGCGGAAGATCCGCGCGGGCGATCAGGACGCGCTGCAGGAGCTGGTGAAGCGCAACCTGCGCTTCGTGATCTCGGTGGCCAAGAAGTACCAGAACCGCGGCCTCCCGCTCATCGACCTGATCGGCGAGGGAAACGTCGGGCTGCTCACGGCCGCCCGGAAGTTCGACCCCGACCAGGGCGTCAAGTTCATCTCGTACGCCGTGTGGTGGATCCGGCAGGCCATCCTCTCGTCGCTCGCGCGCCAGGGGCGCACGGTGCGCGTGCCGCTCAACCGCACCGCCGACCTCTCGCGCATCATCAAGGCGTCGGAGATCCTGCGCCAGAAGCTGCGTCGCGAGCCGAGCCCCGAGGAGCTCTCGCAGCTCACCGGGCTCTCGGTGGACGTGGTGCAGTCGCTCGCGGCGCTCAACACGGGCGACGTGCGCCTCGACGCGCCGATGGACCCCGAGGGCGACCGCGCCCTCATCGAGCGCTTCGTCGCCGACGAGATGCCCGACACCGAGGAGGAGGCGATGAACCGCTTCCTCACCGACGAGATCGAGCAGGCTCTCGGCACGCTCCCGCCGCGCGACGCGAAGGTCCTGCGGCTGTACTTCGGCCTCGAGGGCGGGCGCGAGCACACGCTCGAGGAGATCGGCTCCATGCTCGGCGTCACGCGCGAGCGCGTGCGCCAGCTCCGCGACCGCGCGCTCAAGCGGCTCCGCGAGGGCGACGTCGGCCGCGCGCTCGGCAGCTTCGCCGCCTGA
PROTEIN sequence
Length: 296
MTEVKRRRRRAAPAGIAPNEPERDILDQYLYEVSTYPLLKPVEEIELARKIRAGDQDALQELVKRNLRFVISVAKKYQNRGLPLIDLIGEGNVGLLTAARKFDPDQGVKFISYAVWWIRQAILSSLARQGRTVRVPLNRTADLSRIIKASEILRQKLRREPSPEELSQLTGLSVDVVQSLAALNTGDVRLDAPMDPEGDRALIERFVADEMPDTEEEAMNRFLTDEIEQALGTLPPRDAKVLRLYFGLEGGREHTLEEIGSMLGVTRERVRQLRDRALKRLREGDVGRALGSFAA*