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S1-16-all-fractions_k255_6406807_1

Organism: S1-16-all-fractions_metab_10

partial RP 21 / 55 MC: 4 BSCG 26 / 51 MC: 4 ASCG 11 / 38 MC: 3
Location: 3..542

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 175.0
  • Bit_score: 156
  • Evalue 2.70e-35
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 175.0
  • Bit_score: 156
  • Evalue 5.40e-36
2'-5' RNA ligase id=3894475 bin=GWC2_Proteo_65_14_Ab886 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 183.0
  • Bit_score: 119
  • Evalue 2.60e-24

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 540
GTCCCCGAGGAGACGCGTCAGGCGCTGCACGAGGCGGCGGCGCCCCTGCGGGAGGCGGCGCCCGAGGGGGTGAGCTGGACGGCGGCCGAGAAGATCCACCTCACGCTGAAGTTCCTCGGCGAGCAGCCGGACGACATGCCGGCACGCCTCGTCGCGGCGCTGCGCGGGCCGCTCGCGCGTGCGCGCCCGGTCGACCTGGACCTCCGCGGCGTCGGCGCGTTTCCCGCGATGAAGCGGCCGCGCGTGGTGTGGGTGGGCGTCCGGCCGGAGCCGCGCCTCGAGCTCCTCCACCACGACGTGGAGGTGGCGTGCGAGGGGATCGGCTTCGAGGTGGAGGGGCGTCCCTTCCGCCCGCACCTCACGCTGGGACGTGTGCGCCCGGGCGCGCCGCCCGATCTCCCGCGCCGGCTCGCGGCGGCGGCGCGCGAGGTGCACCTTCGGGAGGCCGCGCGGGTAGAGACGGTGGACGTGATGCGGAGCGAGCCCGCCGCCGGCGGCTCGCGATACACGGTGCTGGAGCGCGTTCCGCTCGGGACCTAA
PROTEIN sequence
Length: 180
VPEETRQALHEAAAPLREAAPEGVSWTAAEKIHLTLKFLGEQPDDMPARLVAALRGPLARARPVDLDLRGVGAFPAMKRPRVVWVGVRPEPRLELLHHDVEVACEGIGFEVEGRPFRPHLTLGRVRPGAPPDLPRRLAAAAREVHLREAARVETVDVMRSEPAAGGSRYTVLERVPLGT*