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S1-16-all-fractions_k255_467267_4

Organism: S1-16-all-fractions_metab_10

partial RP 21 / 55 MC: 4 BSCG 26 / 51 MC: 4 ASCG 11 / 38 MC: 3
Location: comp(2197..3453)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 412.0
  • Bit_score: 546
  • Evalue 2.00e-152
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 412.0
  • Bit_score: 546
  • Evalue 5.60e-153
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADU36466.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 412.0
  • Bit_score: 546
  • Evalue 2.80e-152

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGGCTGACGCGGGGGACATCCGCGCGGTGGTGGAGGCGACCTACCGCGCGGAGTCCCGCCGCGTCCTCGCGACGCTCACGCGCCTCCTCGGCGACCTGGACCTGGCCGAGGAGGCGCTGCACGACGCGTTCGCGGCGGCGGTGGAGCGGTGGCCCGTCGAGGGCGTCCCCGCGAGCCCGCGCGCGTGGCTCGTGAGCGCGGGGCGCTTCCGCGCCATTGATCACATGCGCCGCCGCACGTGGCTCGACGAGCGGCGCGACGCCGTGCTGCACGAGGGACCGGTCGAGGCGCCGGCGCCGGACGCGGCGGATCCCGACGCGATCGAGGACGACCGGCTGCGGCTCGTCTTCACCTGCTGCCACCCGGCGCTCGCGCTCGACGCGCAGGTGGCGTTGACGCTGCGCACGGTGTGCGGGCTCACGACGGAGGAGATCGCGCGGGCCTTCATCGTCCCCGCGCCGACGCTCGCGCAGCGCATCGTGCGCGCGAAGGCGAAGATCCGCGACGCGCGCATCCCGTACGAGGTGCCCGGGCCGGCCGAGCTCCCCGAGCGGCTCGACGCGGTGCTCGCGGTCGTGTACCTGATCTTCAACGAGGGGTACGCGGCCACCGGGGGCGATCACGTCACGCGCGCCGACCTCGCGGCGGAGGCCATCCGACTCGGCCGCCTCATCGTCGCGCTGCTGCCCGACCCCGAAGCGGTGGGGCTGCTCGCGCTGATGCTCCTGCACGACTCCCGCCGCGCGGCCCGTGCGGACGACGCGGGAATGCCCGTGCTGCTCGACACGCAGGACCGCTCGCGCTGGGACCGCGCACAGATCGCGGAGGGACTGGAGCTCACCGAGCGGGCGCTCCGCACGCGGCGCGTGGGCCCGTACGCGCTGCAGGCCGCCATCGCGGCGCTGCACGCCGAGGCACCGAGCAGCGCGAGCACGGACTGGCCGCAGATCGTCGCGCTGTACGACGTGCTGCACCGCGTCCAGCCGTCGCCCGTGGTGGCGCTCAACCGCGCCGTGGCCGTGGCCATGCGCGACGGCGATGCGGCGGGGCTCGCGCTGGTGGATGCGCTGCTCGCACAGGGCGAGCTCGCGCGCTACCCGCTCGCCCACGCGACGCGCGCCGCGCTCCTGCGCCGGCTCGGCCGCGCGCGGGAGGCGCGCGCGGCGTACGAGGCGGCACGCGCGTTGACGCCGGAGGGGGCGCAGCGGCGGTTCATCGAATCGCGGCTGGAGGAGAGCAGGGAGCAGGGTGGCTGA
PROTEIN sequence
Length: 419
MADAGDIRAVVEATYRAESRRVLATLTRLLGDLDLAEEALHDAFAAAVERWPVEGVPASPRAWLVSAGRFRAIDHMRRRTWLDERRDAVLHEGPVEAPAPDAADPDAIEDDRLRLVFTCCHPALALDAQVALTLRTVCGLTTEEIARAFIVPAPTLAQRIVRAKAKIRDARIPYEVPGPAELPERLDAVLAVVYLIFNEGYAATGGDHVTRADLAAEAIRLGRLIVALLPDPEAVGLLALMLLHDSRRAARADDAGMPVLLDTQDRSRWDRAQIAEGLELTERALRTRRVGPYALQAAIAALHAEAPSSASTDWPQIVALYDVLHRVQPSPVVALNRAVAVAMRDGDAAGLALVDALLAQGELARYPLAHATRAALLRRLGRAREARAAYEAARALTPEGAQRRFIESRLEESREQGG*