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S1-16-all-fractions_k255_2987715_21

Organism: S1-16-all-fractions_metab_13

partial RP 26 / 55 MC: 3 BSCG 28 / 51 MC: 9 ASCG 11 / 38 MC: 3
Location: 20633..21616

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SBP4_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 327.0
  • Bit_score: 623
  • Evalue 7.70e-176
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 327.0
  • Bit_score: 623
  • Evalue 2.20e-176
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 327.0
  • Bit_score: 623
  • Evalue 1.10e-175

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
GTGACGCTGCTGCAGTCTTCCACCACCGACACCCTCGAGGTCCGCTCGCCGCGCCGCGAGCCGGACACCAGCGGGCTGGTCTCGACCGACCTCGTCCGGGTGTACCTCAACACCATCGGCAAGACCGCGCTGCTGACCGCCGAGCAGGAGGTCGAGCTCTCCAAGCGGATCGAGGCCGGTCTCTACGCCGAGCGCCTGCTCGCCGAGCGGCAGCTGACCCCTGCCCTGCAGCGGGACTACAAGGCGCTGGCCGCCGACGGCAAGGCCGCCAAGCGGCACCTGCTCGAGGCCAACCTGCGCCTGGTCGTCTCGGTGGCCAAGCGCTACACCGGCCACGGCATGACGTTCCTGGACCTCATCCAGGAGGGCAACGTCGGCCTGATCCGGGCGGTCGAGAAGTTCGACTACACCAAGGGCTTCAAGTTCTCGACGTACGCGACGTGGTGGATCCGCCAGGCCATCACCCGCGCGATGGCCGACTCCGGCCGCACCATCCGGCTGCCCGTGCACCTCGCCGAGCAGGTCAACAAGGTGGTGCGCACCCGGCGCCGGATCCACCAGGAGCTCGAGCGCGAGCCCACCGCCGAGGAGCTGGGCCTCGAGCTCGACATGACCCCCGAGCGGATCACCGAGCTGCTGGAGTACTCCCGCGACCTGGTGTCGCTGGACCAGACGGTCGGTGCGGACGAGGAGTCCCGCCTCGGTGACTTCATCGAGGACGCCGACGCCGCGGTCGCCGAGGACGCCGTGGCCTTCCAGATGATGAAGGGCGACGTGCGCAACGTGCTCGCCACGCTGGAGGAGCGGGAGCGCGACGTGGTCGTGCTGCGCTTCGGCCTCGACGGCGGCCAGCCCCGGACGCTGGAGCAGATCGGCAAGCAGTTCGGTCTCTCCCGCGAGCGGGTCCGCCAGATCGAGCGCGAGACGATGGCCAAGCTGCGCGACCCGCAGCGCGCCGACGCCCTGCGCGACTACCTCGCCTGA
PROTEIN sequence
Length: 328
VTLLQSSTTDTLEVRSPRREPDTSGLVSTDLVRVYLNTIGKTALLTAEQEVELSKRIEAGLYAERLLAERQLTPALQRDYKALAADGKAAKRHLLEANLRLVVSVAKRYTGHGMTFLDLIQEGNVGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADSGRTIRLPVHLAEQVNKVVRTRRRIHQELEREPTAEELGLELDMTPERITELLEYSRDLVSLDQTVGADEESRLGDFIEDADAAVAEDAVAFQMMKGDVRNVLATLEERERDVVVLRFGLDGGQPRTLEQIGKQFGLSRERVRQIERETMAKLRDPQRADALRDYLA*