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S1-16-all-fractions_k255_5896378_1

Organism: S1-16-all-fractions_metab_13

partial RP 26 / 55 MC: 3 BSCG 28 / 51 MC: 9 ASCG 11 / 38 MC: 3
Location: 3..281

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7C6_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 98.0
  • Bit_score: 165
  • Evalue 1.60e-38
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 98.0
  • Bit_score: 165
  • Evalue 4.50e-39
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB73426.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 98.0
  • Bit_score: 165
  • Evalue 2.30e-38

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 279
GACGACGTCCTGACCCGGCTGGGCACCGAGACCGTGCACCGGATGTGCGCGGGGCTGCCGGCCGACCAGCGCTCGGTCCTGCTGCTGCGGGTGCTCGCCGACCTCACCGTCGAGCAGGTGGCCGCGGTGATGGACCGCTCGGTGGGCTCGGTCAAGGCGCTGCAGCGGCGCGGGCTGCGCCGGCTGCGTGCCGAGCTGGAGCCAGCGGGGACCCCCCGGACGGGTGGGACGGCCGGCGCACCCCTGTCGGCCCGCGCGGCGATGACGGGAGCGAGATGA
PROTEIN sequence
Length: 93
DDVLTRLGTETVHRMCAGLPADQRSVLLLRVLADLTVEQVAAVMDRSVGSVKALQRRGLRRLRAELEPAGTPRTGGTAGAPLSARAAMTGAR*