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S1-16-all-fractions_k255_330546_16

Organism: S1-16-all-fractions_metab_13

partial RP 26 / 55 MC: 3 BSCG 28 / 51 MC: 9 ASCG 11 / 38 MC: 3
Location: comp(13947..15356)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 469.0
  • Bit_score: 839
  • Evalue 1.80e-240
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDU1_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 469.0
  • Bit_score: 839
  • Evalue 1.30e-240
MiaB-like tRNA modifying protein YliG similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 469.0
  • Bit_score: 839
  • Evalue 3.60e-241

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
GTGGCGGTGGTGACCCTCGGGTGCGCCCGCAACGAGGTCGACTCGGAAGAGCTGGCCGGCCGGCTGGCCACGGGCGGCTACCGCCTCGTCGAGGACGCCGAGGGCGCCGACGCCGTCCTGGTGAACACCTGCGGCTTCATCGAGTCGGCCAAGAAGGACAGCGTTGACGCGATCCTGGCCGCCACCGACTCCGGCGCCCGGGTGGTCGCGGTCGGCTGCATGGCCGAGCGGTACGGCTCCGAACTCGCCGGCGCGCTGCCCGAGGCGACGGTGCTCGGCTTCGACGACTACGCCGCGATCGGCGACCGGCTCGACGACGTGCTCACCGGCCGCCCGCTGGTCCCGCACGACCCCCGCGACCGGCGCCTCTTGCTGCCGATCAGCCCGGTCGATCGCACGGCGGCGGCCGCCGCGGTCGACGCCCCGGTCATCCCCGGCCACGGCTGGGTGCAGCGGCGGCGGCTGACCTCCGGCCCGTCGGCCGCGCTGAAGCTCGCCTCGGGCTGCGACCGGCGGTGCGCCTTCTGCGCCATCCCGGCCTTCCGCGGCTCTTTCGTCTCCCGGCCGCCGGCCGAGGTGCTCGGCGAGGCGCAGTGGCTGGCCGCCCAGGGCGTCACCGAGCTGGTGCTGGTCAGCGAGAACTCCACGTCCTACGGCAAAGACCTCGGTGACCTGCGGCTGCTGGAGCGGCTGCTGCCGCAGCTGGCCGCCGTCGAGGGGATCGCCCGGGTGCGGGTCGCCTACCTGCAGCCGGCCGAGTTGCGGCCCGGCCTGCTCGAGGTCATCGCGGGCGGGGGCGGGCCCGGCGCCGTCATAGCCCCCTACTTCGACCTGTCCTTCCAGCACTCCTCGCCGACCCTGCTGCGCCGGATGCGCCGGTTCGGTGGCACCGGCGACTTCCTCGCGCTGATCGAGCGGGCCCGCGCGCTGGCCCCGACCGCCGGGTTCCGCACCAACGTCATCCTCGGCTTCCCCGGGGAGACCGAGGACGACGTCACCGAGCTCGAGCGCTTCCTCGTCGAGGCCCGCCTCGACGCCGTCGGGGTGTTCGGCTACTCCGACGAGGAGGGCACCGAGGCGATGGGTCTGCCCGGCAAGCTCGACCAGGCCGAGATCGACGCCCGCGTCCGGCGTGTCACCGACCTGGTGGAGGAGCTCACCGCGCAGCGCGCCGAGGACCGGCTGGGGGAGCGGGTCGAGGTCCTGCTCACCGAGGACCTCTCCGCCGACGAGGGGCCCGGGACGTGGGCCGGGCACGCCGCCCACCAGGACCCCGAGGCAGACGGGACGACGACGGTCACCGGGGTGCCCGCCGACGCGGTCGCGGGGCAGGTGGTGGCCGCGGAGGTCGTCGATACGGAGGGCGTGGACCTGGTGGCCACGGCACTGGTGCCCGCGGTGCGCGCATGA
PROTEIN sequence
Length: 470
VAVVTLGCARNEVDSEELAGRLATGGYRLVEDAEGADAVLVNTCGFIESAKKDSVDAILAATDSGARVVAVGCMAERYGSELAGALPEATVLGFDDYAAIGDRLDDVLTGRPLVPHDPRDRRLLLPISPVDRTAAAAAVDAPVIPGHGWVQRRRLTSGPSAALKLASGCDRRCAFCAIPAFRGSFVSRPPAEVLGEAQWLAAQGVTELVLVSENSTSYGKDLGDLRLLERLLPQLAAVEGIARVRVAYLQPAELRPGLLEVIAGGGGPGAVIAPYFDLSFQHSSPTLLRRMRRFGGTGDFLALIERARALAPTAGFRTNVILGFPGETEDDVTELERFLVEARLDAVGVFGYSDEEGTEAMGLPGKLDQAEIDARVRRVTDLVEELTAQRAEDRLGERVEVLLTEDLSADEGPGTWAGHAAHQDPEADGTTTVTGVPADAVAGQVVAAEVVDTEGVDLVATALVPAVRA*