ggKbase home page

S1-16-all-fractions_k255_5090924_3

Organism: S1-16-all-fractions_maxb_47

partial RP 42 / 55 MC: 9 BSCG 40 / 51 MC: 13 ASCG 10 / 38 MC: 4
Location: comp(578..1357)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMD0_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 262.0
  • Bit_score: 249
  • Evalue 3.10e-63
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH86930.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 262.0
  • Bit_score: 249
  • Evalue 4.40e-63
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 28.8
  • Coverage: 208.0
  • Bit_score: 75
  • Evalue 1.70e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 780
ATGATACCTGCCGATCAAGCGGTAGAAGAACTCATACAGAAATATTACAAGCTGGTCTTCCATACAATTTATGGTATGACGGGCAACTGGGAAGAAAGTCAGGACCTTACGCAGGATACTTTTCACCAGGCCCTAAAAGCTATTGATGCTGCGCGCGCAGCAAGTGGGAGCCAGTTTCGTGAGAAAGCCTGGTTGCTGCGTATCGCACTGAATACTGTACGTATGCAACGTCGGCGGCGCAATCTTTTTCGCTTTATTCCCTTCTCAAGTATGCAAACAAGGAGGCAGACAGAGCAAACATTCGAGGGAGAGACTGACAGCGATACGCTAAACGAGCGGGCGGCAGCTGTACAACCCGCAGGTTATGGCGCAGCCGCAGCAGATGATCCAGCGGAATTGATAGCCGAACAGGATGTTGTCCAGCGCACGATGGCACGTCTACCAGCGATACTGCGCGAGTGCTTGATCCTGGCGGTTATTGGTAATTTCTCTACTAGTGAGATTGCCCATATGCTTGATCTGCAAGAGGCCGCTGTACGTCAACGTCTCACCCGAGCGCGTAAACAATTTCAACAGATGTACGTTCTTGAGAGCGGTGAGCAGATCGGCGATAATGAAATATCTGCCACGACGCCGGGAAAAGCATCCAGGCATACTAGTAAACACCAGAATTATGATGAACGATTTGAGTGCCGGGCAGAGATAGCGGATGACGATGGTTCGCAACTCGACGCACGGCCCCTGATTTCGCGGAGGAACTATGCAGAAGGACTCTCTTGA
PROTEIN sequence
Length: 260
MIPADQAVEELIQKYYKLVFHTIYGMTGNWEESQDLTQDTFHQALKAIDAARAASGSQFREKAWLLRIALNTVRMQRRRRNLFRFIPFSSMQTRRQTEQTFEGETDSDTLNERAAAVQPAGYGAAAADDPAELIAEQDVVQRTMARLPAILRECLILAVIGNFSTSEIAHMLDLQEAAVRQRLTRARKQFQQMYVLESGEQIGDNEISATTPGKASRHTSKHQNYDERFECRAEIADDDGSQLDARPLISRRNYAEGLS*