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S1-16-all-fractions_k255_479994_11

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: comp(7994..9478)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKY0_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 498.0
  • Bit_score: 798
  • Evalue 3.40e-228
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 498.0
  • Bit_score: 798
  • Evalue 9.70e-229
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 498.0
  • Bit_score: 798
  • Evalue 4.80e-228

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Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
GTGTCTTCACACGCACGCAAGTTGCTCCCCGCGGAGGTGCTGACGCATCCCTCCATCACGGCCCTGGTCGCCAGCGCCACCCCCCACGGCACCGTGTCCCCCGTTGACGTACGACGGGCCAGTGACGAGGCGGGGGTCGAGCCCAAGCACCTGAAGGCACTCCTGGTGCACCTCAGCGGCCTCGGCATCTCCGTCCAGATCGATGCCACCGGGCTCCGGGCGGTCGCCGCCACCAGCAAGCGCGCGGCCACGTCGTCGGCGGCCAAGAAGGCCCCGGCGAAGAAGGCGGCCACGGCCAAGACGACCGAGCCGGCGAAGAAGGCGGCGCCCGCCAAGAAGGTCGCGGCGAAGACGACCTCGGGCGCGAACGCCTCGGACGACGTGGTCGACCTCGGCGCCGTCGAGCCCGTGGTGATCGGCCCGGACGGCAAGAAGATCCTGCCCGACATCCCGGACGAGGAGTTCGAGAAGGACGTCGCCAAGGACCCCTCGATCAAGGAGGACGAGAAGCAGGCCTTCACCGTCTCCGCGGCCGACGAGACCGACGAGCCCGAGCAGCAGGTCATGGTGGCCGGCGCCACCGCCGACCCGGTCAAGGACTACCTCAAGCAGATCGGCAAGGTCCCGCTCCTCAACGCCGAGATGGAGGTCGAGCTGGCCAAGCGCATCGAGGCCGGCCTGTTCTCCGAGGAGAAGCTCGCCAAGGGCGGCCGGATCAGCGCGAAGATGCTCGAGGAGTACGAGTGGATCTCCCAGGACGGCCGCCGCGCCAAGAACCACCTCCTGGAGGCCAACCTGCGGCTCGTGGTCTCCCTGGCCAAGCGCTACACCGGTCGCGGCATGCTCTTCCTCGACCTGATCCAGGAGGGCAACCTCGGCCTGATCCGCGCGGTCGAGAAGTTCGACTACACCAAGGGCTACAAGTTCTCGACGTACGCCACGTGGTGGATCCGTCAGGCGATCACCCGTGCCATGGCCGACCAGGCGCGCACCATCCGCATCCCGGTCCACATGGTCGAGGTCATCAACAAGCTCGCCCGCGTGCAGCGCCAGATGCTCCAGGACCTGGGTCGCGAGCCCACGCCGGAGGAGCTGGCCAAGGAGCTCGACATGACCCCGGAGAAGGTCATCGAGGTCCAGAAGTACGGCCGCGAGCCCATCTCGCTGCACACGCCCCTGGGCGAGGACGGCGACTCCGAGTTCGGTGACCTCATCGAGGACTCCGAGGCGATCGTCCCGGCGGACGCGGTGTCGTTCACGCTGCTCCAGGAGCAGCTGCACGCCGTGCTCGACACCCTCTCGGAGCGCGAGGCGGGCGTGGTGTCCATGCGCTTCGGCCTCACCGACGGCCAGCCGAAGACCCTCGACGAGATCGGCAAGGTCTACGGCGTGACCCGCGAGCGGATCCGTCAGATCGAGTCGAAGACGATGTCCAAGCTGCGGCACCCCAGCCGGTCGCAGGTCCTGCGCGACTACCTGGACTGA
PROTEIN sequence
Length: 495
VSSHARKLLPAEVLTHPSITALVASATPHGTVSPVDVRRASDEAGVEPKHLKALLVHLSGLGISVQIDATGLRAVAATSKRAATSSAAKKAPAKKAATAKTTEPAKKAAPAKKVAAKTTSGANASDDVVDLGAVEPVVIGPDGKKILPDIPDEEFEKDVAKDPSIKEDEKQAFTVSAADETDEPEQQVMVAGATADPVKDYLKQIGKVPLLNAEMEVELAKRIEAGLFSEEKLAKGGRISAKMLEEYEWISQDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAIVPADAVSFTLLQEQLHAVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD*