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S1-16-all-fractions_k255_3279605_3

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: 2231..2887

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQU5_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 223.0
  • Bit_score: 288
  • Evalue 3.00e-75
RNA polymerase sigma factor SigM similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 223.0
  • Bit_score: 288
  • Evalue 8.40e-76
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:ABL84180.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 223.0
  • Bit_score: 288
  • Evalue 4.20e-75

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Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 657
GTGACGGACCCCCGCTCGGACCAGGCGCTGCTCCAGGCCCACGTGGACGGCGACGCCGACGCGTTCGGCGAGCTCTTCACCCGCCACCGCGACCGGCTGTGGGCGGTCGCGCTGCGCACGATGGGCAACCCCGAGGATGCCGCCGACGGCCTCCAGGACGGCATGATCGCCGCCTTCCGCCGGGCCGGCTCCTACCGCGGTGAGGCCGCGGTCACCACGTGGTTGCACCGCGTCGTCGTCAACGCGTGCCTCGACCGGATCCGGGCCGCGAAGATCCGCCGGCTCGACGCGCTGCCGGACGACGTCGAGGACCGCGGCACCCTGGTCGCGGCGGCCGTGCACGACGACCAGCCCGACGCGGCCGCCGAGGACTCCGAGCGTCGTCGCCGGGTCCTCGCCGCCCTCGCCACGCTCCCAGCCGACCAACGGGCGGCGCTCGTCCTCGTCGACATGGAGGGGTATCCCGTCGCCGAGGTGGCCCAGATGCTCGGCTGCGCCGAGGGCACCGTGAAGTCGCGCTGCTCGCGCGGCCGCACGAAGCTGGCGGGGCTCCTGCTCGACCTCCACCGCCCCGCCGGTGACCCGCCTCACGGGAACCCGCCCCCGGACGGTCCCGTCCAACCCACCGTGCGGCCCCGCGGTCCGCCCACGTCCTGA
PROTEIN sequence
Length: 219
VTDPRSDQALLQAHVDGDADAFGELFTRHRDRLWAVALRTMGNPEDAADGLQDGMIAAFRRAGSYRGEAAVTTWLHRVVVNACLDRIRAAKIRRLDALPDDVEDRGTLVAAAVHDDQPDAAAEDSERRRRVLAALATLPADQRAALVLVDMEGYPVAEVAQMLGCAEGTVKSRCSRGRTKLAGLLLDLHRPAGDPPHGNPPPDGPVQPTVRPRGPPTS*