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S1-16-all-fractions_k255_6094733_5

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: comp(3881..4438)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 185.0
  • Bit_score: 238
  • Evalue 5.50e-60
2'-5' RNA ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y2A4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 185.0
  • Bit_score: 238
  • Evalue 3.90e-60
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 185.0
  • Bit_score: 231
  • Evalue 1.80e-58

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGTTCGTGGCGGTCGTCCCGCCGACCGAGGTGGTGGAGCACCTCGACGAGTTCCTGGCCCCACGCCGCGAGTCCGCGGCCTTCCGGTGGTCGTCCCCCGACCAGTGGCACCTGACGGCCGCCTTCTCCGCGGAGGTGCCGGAGCGCAGCCTCGACGACCTGGACGAGCGCCTCGCACGCGCGGCCGGTCGGCGCCGGCCCTTCACGCTGCGCGTCGCGGGGGGCGGCGCGTTCCCCCACCCCGACCGTGCCCGGGTGCTGTACGCCCGCGTCGACGCGGACGCGGACGCCGCCACCGAGCTCGAGCGGCTCTCCTCCGGGTGCCGGGCCGCGTTCTCGAGGTCGGGGTCGAGGGCCGACGGCCAGCGCTTCCGTCCCCACCTCACCCTCGCCCGGCTGGGGCACCCCGACAACGTCACCTCGTGGGTCCGGCTGCTCGACGCCTACGGCGGGCCCGCGTGGGAGGTCACGGAGGTCGCGCTGGTCGCCTCCCACCTCGGCGAGGGGCCCCGAGGGCGCCCCCGGCACGAGGTCCTCGGCACCTACCCGCTCGGCTGA
PROTEIN sequence
Length: 186
MFVAVVPPTEVVEHLDEFLAPRRESAAFRWSSPDQWHLTAAFSAEVPERSLDDLDERLARAAGRRRPFTLRVAGGGAFPHPDRARVLYARVDADADAATELERLSSGCRAAFSRSGSRADGQRFRPHLTLARLGHPDNVTSWVRLLDAYGGPAWEVTEVALVASHLGEGPRGRPRHEVLGTYPLG*