ggKbase home page

S1-16-all-fractions_k255_6732158_1

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: comp(3..1613)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 538.0
  • Bit_score: 824
  • Evalue 5.20e-236
DNA-directed RNA polymerase subunit beta n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1B7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 538.0
  • Bit_score: 824
  • Evalue 3.70e-236
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 536.0
  • Bit_score: 767
  • Evalue 1.50e-219

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1611
TTGGCCGCGCGCAGCTCCGCTGGTAACCACCGTCGCACCTCTTTCGCAAAGATCACCGAACCTCTCGAGGTTCCCCCGCTCATCTCGCTCCAGACCGACAGCTTCGACTGGCTGGTCGGCAACGAGCGGTGGGAGGCCACCGTCGCAGCCCGTCGGGCCAACGGTGAGGACGTCTCCGAGAAGACCGGTCTGCAGGAGATCTTCGAGGAGATCTCCCCGATCGAGGACTTCTCCGAGACGATGATGCTCTCGTTCGACAACCCCGTCTTCCTCGACGAGAAGTACACCGAGGAGGAGTGCAAGGAGAAGGACTTCACCTACTCCCGCCCGCTCTACGTCTCGGCCGAGTTCATGAACCACGAGACCGGCGAGATCAAGGGCCAGACGGTCTTCATGGGTGACTTCCCCATGATGACCAAGAAGGGCACCTTCATCATCAACGGCACCGAGCGGGTCGTCGTGTCCCAGCTCGTGCGTTCGCCCGGCGTCTACTTCGAGTCGTCCCCCGACAAGACCTCGGACAAGGACATCTTCACCGCCAAGCTCATCCCGAGCCGTGGCGCGTGGCTGGAGTTCGAGATCGACAAGCGCGACCTGGTGGGCGTGCGCCTGGACCGCAAGCGCAAGCAGAACGTCACCGTCCTGCTCAAGGCGCTCGGCTGGACCACCGACCAGATCCGCGAGGAGTTCGGTCAGTACGAGTCGATGATGCTGACCCTCGAGAAGGACAGCGTCCGCTACGAGGTCGTCCACGAGGAGCTGCAGAAGAAGGCGCGGGGCGAGGCCCCGACCGCTGAGCAGGTCAACCTCGAGGTCACCCGCCTCGCGCTGCTCGACATCTACCGCAAGCTGCGCCCCGGCGAGCCGCCGACGGCCGAGGCCGCGCAGACGCTGCTCAACAACTACTACTTCAACTCCAAGCGCTACGACCTGGCGAAGGTCGGCCGCTACAAGATCAACAAGAAGCTCGGCCTGCACGAGGCCTTCGACCAGCAGACGCTGACCATCGACGACGTCGTGGCCGCCATCCGCTACGTCGTGCAGCTGCACGCCGCGGGTGTCCAGGGCGAGGCTCCTGACCTGGTCGACGCCGCGGGCAACGTGGTCGAGGGCCCCGACGGTGCCCCCGTCAAGGTCCAGGCCGACGACATCGACCACTTCGGCAACCGCCGGATGCGCACGGTCGGCGAGCTCATCCAGAACCAGCTCCGCACGGGCCTGGCCCGCATGGAGCGCGTGGTCCGCGAGCGGATGACGACCCAGGACGTCGAGGCCATCACGCCGCAGTCCCTGATCAACATCCGTCCCGTGGTCGCGGCGCTGAAGGAGTTCTTCGGCACCTCGCAGCTCTCGCAGTTCATGGACCAGACCAACCCGATCGCCGGTCTGACCCACAAGCGTCGCCTGAACGCGCTCGGCCCGGGCGGTATCTCCCGTGACCGTGCGCAGATGGACGTGCGTGACGTGCACCCGTCGCACTACGGCCGGATGTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGTCTGATCGGCTCGCTCGCGTCGTACGGACGGATCAACCCGTTCGGCTTCGTCGAGACGCCGTACCGGGTCGTCAAGAAGGGTCGG
PROTEIN sequence
Length: 537
LAARSSAGNHRRTSFAKITEPLEVPPLISLQTDSFDWLVGNERWEATVAARRANGEDVSEKTGLQEIFEEISPIEDFSETMMLSFDNPVFLDEKYTEEECKEKDFTYSRPLYVSAEFMNHETGEIKGQTVFMGDFPMMTKKGTFIINGTERVVVSQLVRSPGVYFESSPDKTSDKDIFTAKLIPSRGAWLEFEIDKRDLVGVRLDRKRKQNVTVLLKALGWTTDQIREEFGQYESMMLTLEKDSVRYEVVHEELQKKARGEAPTAEQVNLEVTRLALLDIYRKLRPGEPPTAEAAQTLLNNYYFNSKRYDLAKVGRYKINKKLGLHEAFDQQTLTIDDVVAAIRYVVQLHAAGVQGEAPDLVDAAGNVVEGPDGAPVKVQADDIDHFGNRRMRTVGELIQNQLRTGLARMERVVRERMTTQDVEAITPQSLINIRPVVAALKEFFGTSQLSQFMDQTNPIAGLTHKRRLNALGPGGISRDRAQMDVRDVHPSHYGRMCPIETPEGPNIGLIGSLASYGRINPFGFVETPYRVVKKGR