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S1-16-all-fractions_k255_5349483_1

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: comp(1..699)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Actinopolymorpha alba RepID=UPI000376A807 similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 233.0
  • Bit_score: 357
  • Evalue 9.50e-96
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 231.0
  • Bit_score: 352
  • Evalue 5.10e-95
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:AEK45659.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 231.0
  • Bit_score: 352
  • Evalue 2.50e-94

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
GTGACCGTCGACGAGGTCATCACCCGGGTCCACCGCGACGAGTGGGCCCGGGTGGTGGCCACGCTCGCCCGACGCTTCGGCGACCTCGACATCGCCGAGGAGGCCGCGGCCGAGGCGTTCGCCGTCGCCGTCGAGCGCTGGCCCGCGGACGGCGTACCTCCCAACCCGGGCGCCTGGCTGACCACGACGGCCGGCAACAAGGCCCTGGACCGGCTCCGTCGCGAGAGCAAGCGCGACGCCAAGCACCGGCAGGCACTCATGATCGACCAGTCCTCATCCCCGCCCGAGCCGATCGGCGCCATCGCCGACGAGCGCCTCCGGCTCGTCTTCACCTGCGCCCACCCCGCCCTCGCCATGGAGGCGCGCATCGGCCTGACCCTCCGCATGGTCGGTGGCCTGACGGTGCCGGAGATCGCCCGCGCGTTCCTCGTGCCGGAGACGACGATGGCGCAGCGCATCACCCGCGCCAAGGCCAAGATCAAGGCCGCCGGCATCCCGTGGAAGGTCCCGGACGCCGACGACCTCCCGACCCGCGTCGCTGGCGTGCTGGCCGTGCTGTACCTCGTCTTCAACGAGGGCTACCTCGCCAGCAGTGCGGAGGCCGACCCGATCCGGGCCGAGCTGACCGCCGAGGCCGTACGCCTCACCCGGCTGGTGCACGAGCTCCTGCCCGACGACGGCGAGGTCGTCGGCCTGCTG
PROTEIN sequence
Length: 233
VTVDEVITRVHRDEWARVVATLARRFGDLDIAEEAAAEAFAVAVERWPADGVPPNPGAWLTTTAGNKALDRLRRESKRDAKHRQALMIDQSSSPPEPIGAIADERLRLVFTCAHPALAMEARIGLTLRMVGGLTVPEIARAFLVPETTMAQRITRAKAKIKAAGIPWKVPDADDLPTRVAGVLAVLYLVFNEGYLASSAEADPIRAELTAEAVRLTRLVHELLPDDGEVVGLL