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S1-16-all-fractions_k255_5956258_2

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: 1988..2533

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 174.0
  • Bit_score: 306
  • Evalue 1.60e-80
Peptide deformylase n=1 Tax=Nocardioides sp. CF8 RepID=R7XWQ9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 174.0
  • Bit_score: 306
  • Evalue 1.10e-80
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 180.0
  • Bit_score: 297
  • Evalue 1.50e-78

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGGCCGTCCAGCCGATCCGCTTCTTCGGTGATCCCGTGCTCCGTCAGCGTGCGATCGAGGTCGACAGCTTCGATCGTGAGCTCCAGCAGCTCGTCACCGACCTCACCGACACGATGCTGGCCGCCCCCGGTGCCGGGCTCGCAGCGCCTCAGATCGGCATCGGGCTGCGCGTCTTCACCTGGCACGTCGAGGGACAGCTCGGTCACCTGGTGAACCCGTCGCTCGAGCTCTCGGACGAGACCCAGGACGGCGCCGAGGGCTGCTTGTCGCTACCGGAGCTGACCTACGACTGCCTGCGCGCGCTGTCGGTCGTCGCGACCGGCTTCGACATGTACGGCGAGCCCGTGCGGATCGAGGCCTCCGAGCTGCTGGCGCGCGCCATCCAGCACGAGACCGACCACCTCGACGGCATCCTCTTCATCGACAAGCTGGACACCGCGGCACGCAAGGCGGCCATGAAGGCGATCCGGGAGTCCGACTGGTTCGGGCTCGAGCAGCCGACGGTGAAGGTCAGTCCCCACGCCACCAACGGGCTCTCGTTCTGA
PROTEIN sequence
Length: 182
MAVQPIRFFGDPVLRQRAIEVDSFDRELQQLVTDLTDTMLAAPGAGLAAPQIGIGLRVFTWHVEGQLGHLVNPSLELSDETQDGAEGCLSLPELTYDCLRALSVVATGFDMYGEPVRIEASELLARAIQHETDHLDGILFIDKLDTAARKAAMKAIRESDWFGLEQPTVKVSPHATNGLSF*