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S1-16-all-fractions_k255_6009052_1

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: comp(1..420)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 type 2 n=1 Tax=Nocardioides sp. CF8 RepID=R7XTI2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 140.0
  • Bit_score: 172
  • Evalue 2.00e-40
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 140.0
  • Bit_score: 176
  • Evalue 3.90e-42
RNA polymerase ECF sigma factor {ECO:0000313|EMBL:AIY19021.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 140.0
  • Bit_score: 176
  • Evalue 1.90e-41

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Taxonomy

Pimelobacter simplex → Pimelobacter → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGCGACGCACCGAGCGTGAGGCGGCGTACGTCGAGTTCGTCGCAGCACGTCAGCGCCACTTCCGCCGGGTCGCCTATGCGCTCTGCGGGAACTGGACCCAGGCAGAGGACCTCGTGCAGATCGCGCTGGCCAAGCTGTACGTCGCGTGGCCGCGGGTGTGCCGCGACGGTCGCGAGGAGGCATACGTTCGCCAGATCCTGGTGCGCGCCAACATCGACGAGCACCGCAGGCCGTGGCGACGCGAGCACCCGGTCGAGTTCGTGCCCGACGCGCCTGCGCCGAACGCGTCGAGCATCGAGGAGCGGAGCCCCCTGGTGGACGCCCTGGTGGAGCTGCCCGTCATGCAGCGCAAGGTCGTGGTCCTGCGTCATTGGCTCGGGTTGTCCGTGGAGGAGACGGCATTCGAGCTCGGGATTGCC
PROTEIN sequence
Length: 140
MRRTEREAAYVEFVAARQRHFRRVAYALCGNWTQAEDLVQIALAKLYVAWPRVCRDGREEAYVRQILVRANIDEHRRPWRREHPVEFVPDAPAPNASSIEERSPLVDALVELPVMQRKVVVLRHWLGLSVEETAFELGIA