ggKbase home page

S1-16-all-fractions_k255_1574407_11

Organism: S1-16-all-fractions_metab_69

megabin RP 47 / 55 MC: 24 BSCG 47 / 51 MC: 27 ASCG 12 / 38 MC: 5
Location: 11177..11734

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 178.0
  • Bit_score: 148
  • Evalue 4.10e-33
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 179.0
  • Bit_score: 182
  • Evalue 7.20e-44
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 182.0
  • Bit_score: 183
  • Evalue 1.60e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 558
ATGCTCACCCGCTCCGACCCCGAGCTCGTCGCCGCCGTGCTGGCCGGGAGCGACGAGGCGTTCGCCGCGATCGTCGGTCGCTACCGCGACGCGTTCATGCGCTTCGCGGTTCGCATGCTCGGCAGCGCCGCCGACGCGGACGACGCCCTGCAGCTGGCATTCCTCCGCGCGTACCGCGGGCTCGGCGGATGTCGGAACCCGGAGCGGTTGGGGGCGTGGCTAGCGCAGATCGTCTGCAACGAGTGTCGGACGTTCGCGACCCGTCGCGGCCGCCGGGAGCGCCGATTCGTCGACGACGCGGCCGAATTCGAGGACGTGCTCGCGGCGCCGACGACCGGTGCGGCGGACGACGGGGGGGCGCTGCGCGAGGAGATCCAGCGCGCTCTCGACCGACTGGTGCCGGAGCAGCGCGAAGCCTTCGTGCTCAAGCACGTCGAGGAGCTGAGTTACGACGAGATGGCGGAGCTTACCGGGGCAGGAGTCTCCGCGCTCAAGATGCGTGTGAAGCGGGCCTGCGAGCAGCTGCGTGAACTCCTGGAGGAGGTGCACCATGTCTGA
PROTEIN sequence
Length: 186
MLTRSDPELVAAVLAGSDEAFAAIVGRYRDAFMRFAVRMLGSAADADDALQLAFLRAYRGLGGCRNPERLGAWLAQIVCNECRTFATRRGRRERRFVDDAAEFEDVLAAPTTGAADDGGALREEIQRALDRLVPEQREAFVLKHVEELSYDEMAELTGAGVSALKMRVKRACEQLRELLEEVHHV*