ggKbase home page

S1-16-all-fractions_k255_2150141_2

Organism: S1-16-all-fractions_metab_75

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 5 ASCG 12 / 38
Location: 1347..2072

Top 3 Functional Annotations

Value Algorithm Source
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=12554062 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 241.0
  • Bit_score: 369
  • Evalue 1.90e-99
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 238.0
  • Bit_score: 324
  • Evalue 2.00e-86
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 241.0
  • Bit_score: 408
  • Evalue 4.00e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGGCGACGCTGCGCACGCATGATCTCACCAAGAAGTACGGCGGCCGTACCGTCGTTCGCGGTGTGAGCCTGAACGTCACGTCAGGTGAGATCGTCGGCCTCCTTGGACCGAACGGCGCCGGCAAGACCACGACGTTCTACATGACGGTCGGCCTGACCGCACCGGACTCCGGACGGGTCACACTCGACGATACCGACGTCACCGACGATCCGATGTACGTGAGAGCGCGGAAGGGTATCGGGTACCTGCCGCAGGAACCTTCCATTTTCCGCGGGCTCACGGTCGAGCAGAACGTGCTCGCGATTCTCGAGACGCTCGAACTCGCGGCGCCTCAGCGACGGCAGCGCGCCCGCGAGCTGCTCGCCGAGTTGAACCTTTTGCACCTGGCGTCGGCGCCGGCCTACACCCTCTCCGGCGGCGAGCGACGGCGTGCTGAAATCACCCGGGCGCTGGTCATCTCGCCGAAGTTCATCCTGCTCGATGAGCCCTTCGCCGGGATCGACCCGATCGCCGTCACCGACATCCAGAAGATCATCTTTCACCTGAAGGAGCGGGGGATCGGCGTGCTCATCACCGACCACAACGTGCGCGAGACGCTTCGCATCACCGACCGCGCGTACATCGTCCACGATGGCGGCGTCTTCCGGAGCGGCACGCCGGACGAGCTGGCGACCGACGATGACGTGCGGCGAATTTATCTCGGGACCGATTTCAGGTTGGACTAA
PROTEIN sequence
Length: 242
MATLRTHDLTKKYGGRTVVRGVSLNVTSGEIVGLLGPNGAGKTTTFYMTVGLTAPDSGRVTLDDTDVTDDPMYVRARKGIGYLPQEPSIFRGLTVEQNVLAILETLELAAPQRRQRARELLAELNLLHLASAPAYTLSGGERRRAEITRALVISPKFILLDEPFAGIDPIAVTDIQKIIFHLKERGIGVLITDHNVRETLRITDRAYIVHDGGVFRSGTPDELATDDDVRRIYLGTDFRLD*