ggKbase home page

S1-16-all-fractions_k255_2674277_1

Organism: S1-16-all-fractions_metab_75

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 5 ASCG 12 / 38
Location: 1..315

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12554557 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 100.0
  • Bit_score: 89
  • Evalue 2.20e-15
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 86.0
  • Bit_score: 57
  • Evalue 2.60e-06
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 102.0
  • Bit_score: 110
  • Evalue 9.70e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 315
CATGCGGTCGCCATCGCGCAGGACGCGCTCGATCGAGCGATCGCCGCACTGGAGGCACGGGACCGCCTGCGCCTGCGGCTGTACTACGGCGAGGATCTCACCCTGGCCCAGGTCGGGCGGATCACCGGCGAGCACGAGGCGACGGTATCGCGCAAGCTCGATCGGGCGCGCGCGGACCTCCGGCGGCGCGTCGAACGACACCTCCGCGCCGAACACGGCCTGAGTGATGCCGCCATCGGCGAGTGCTTCGCATATGCCGCGGAGGCTCCCGAACTCCACCTCACCCGCCTGCTCTCGAGAGCCGATGACGGCTGA
PROTEIN sequence
Length: 105
HAVAIAQDALDRAIAALEARDRLRLRLYYGEDLTLAQVGRITGEHEATVSRKLDRARADLRRRVERHLRAEHGLSDAAIGECFAYAAEAPELHLTRLLSRADDG*