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S1-16-all-fractions_k255_4142167_8

Organism: S1-16-all-fractions_metab_75

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 5 ASCG 12 / 38
Location: comp(5145..6848)

Top 3 Functional Annotations

Value Algorithm Source
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor id=12556622 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 565.0
  • Bit_score: 837
  • Evalue 7.60e-240
sigma 38, RpoS similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 577.0
  • Bit_score: 707
  • Evalue 2.60e-201
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 570.0
  • Bit_score: 925
  • Evalue 3.00e-266

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1704
TTGTCGATTGAGGACAAGTACGACGAGGTACGACAGCTGGTCAACATCGGCAAGGAGAAAGGCTACTTGCTGTACGACGAGGTCAACGAACTGCTGCCCTCGGAGATCACCTCGTCGGAAGAGCTGGACGATCTGTTCAACACCTTTGGCAGCGCGGGGATCGAGGTGCTCGACGCGGATCAGATGAAGTTCCGTGACGAGAAGACGTTCGATCGCACAGCCGAAGGAAGCGAGGAGATTGAGCTCGACCTCACGCCGGGAGCGCTCGACAAGACGAACGATCCGGTTCGGATGTACCTGCGGGAAATGGGCACAGTGCCGCTGCTCACGCGCGAGGGTGAGGTCGAGATCGCACGGCGCATCGAACGAGGCAAGCTCTCCGTCATCAAATCGATTTCCCGCACGCCGATGGTCACCCGGAAGGTCATCCAGCTCGGAGACGACCTGAAGGCCGAAGAGCGTACCGTCCGTGAGCTGGTGACCTTCTCGGACGATGAGCTGACGGAAGACAAGCTCGAGGACCGCAAGCGTGAAGTGTTGCGGCAGGTGGATGCCGTCCGCAAGGCCCGGGTCACGATGCAGAAGGCCGAGGAAAAGCTCGTCGACATCCCGAAGAAGGACAAGAAGAAGTACCGCAAGTACCGCTGGAAGATGCTGCGGTGCCGGGTCGAGCTTTCGCGGCGCATCCGCGACATCCAGTTCACGGAGATCGTGAAGCGGCGTCTCATCGAGGAAATCAAGGACCAGGTCGAATCTGTGCAGCGCGTGCAGCGCGAGATTGATGCGATCGAGCGGCAGCTCAATCCGAAGAACAAGCGCCAGAAGGTGAAGGAAGAGGACCGCAAGAACCTGCTCAAGCGCCAGAAGGATCTCAGGGTACAGCTGAAGGGAATGTCCGACGAGCTGCAGGAGACCCCGGAGCGGCTCCGGCGCACCCTGGAGACCGTCATCCGCGGCGAGATCCAGGCGGAGCAGGCGAAGAAGGAGCTTGTCGAGGCCAACCTGCGCCTGGTCGTGTCGATCGCGAAGAAGTACACCAACCGCGGCCTGCAGTTCCTCGACCTGATTCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCGACAAGTTCGAGTACCGCCGTGGCTACAAGTTCTCGACCTACGCGACGTGGTGGATCCGGCAGGCGATCACGAGGGCCATTGCCGACCAGGCGCGGACGATTCGCATCCCGGTCCACATGATCGAGACGATCAACAAGCTGATACGTACGTCGCGCGCGCTCGTGCAGGAGCTCGGACGCGAGCCGACGAGCGAGGAGATCGCGGTGCGTATGGACATCCCCGTGTCCAAGGTCCGCAAGGTGCTCAAGATCGCACAGGAGCCCATCTCCCTCGAGACGCCCATCGGCGAGGAGGAAGATTCGCATCTTGGCGACTTCATCGAGGACCGGAACGTCATCTCGCCGTCGGATGCGGTCATCAACCTGAATCTGCGCGAGCAGACCGAGTCGGTGTTGAAGTCGCTGACGCCGCGCGAGGAGAAAGTCATCAAGATGCGCTTCGGCGTTGGCGACGGGAGCGAGCACACCCTCGAAGAAGTGGGCCAGAGCTTCGCGGTCACGCGCGAGCGCATCCGCCAGATCGAGGCCAAGGCGCTGCGCAAACTGCGGCACCCGTCGCGGAGCCGCAAGCTGCGGGCGTTCCTCGAAGGACGGACGCCTTAA
PROTEIN sequence
Length: 568
LSIEDKYDEVRQLVNIGKEKGYLLYDEVNELLPSEITSSEELDDLFNTFGSAGIEVLDADQMKFRDEKTFDRTAEGSEEIELDLTPGALDKTNDPVRMYLREMGTVPLLTREGEVEIARRIERGKLSVIKSISRTPMVTRKVIQLGDDLKAEERTVRELVTFSDDELTEDKLEDRKREVLRQVDAVRKARVTMQKAEEKLVDIPKKDKKKYRKYRWKMLRCRVELSRRIRDIQFTEIVKRRLIEEIKDQVESVQRVQREIDAIERQLNPKNKRQKVKEEDRKNLLKRQKDLRVQLKGMSDELQETPERLRRTLETVIRGEIQAEQAKKELVEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRALVQELGREPTSEEIAVRMDIPVSKVRKVLKIAQEPISLETPIGEEEDSHLGDFIEDRNVISPSDAVINLNLREQTESVLKSLTPREEKVIKMRFGVGDGSEHTLEEVGQSFAVTRERIRQIEAKALRKLRHPSRSRKLRAFLEGRTP*