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S1-16-all-fractions_k255_129042_2

Organism: S1-16-all-fractions_metab_75

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 5 ASCG 12 / 38
Location: comp(278..1159)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12554557 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 288.0
  • Bit_score: 225
  • Evalue 4.20e-56
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 275.0
  • Bit_score: 157
  • Evalue 5.10e-36
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 277.0
  • Bit_score: 243
  • Evalue 2.10e-61

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGGTTGCCAGGATCTTCCTGCGTTCGTCGCTGCACAGTCGCGCCTGATCGCGGGGCTGTACGCCCGGAGCGGGGCCGAACGCTGGGCGTTGTCGCAGGAGTCGCTCGCGCAGGCGCTGCACCGAAGCACCACACATCGGTTCCCCGACGGAGCCACTGAGGGCGAGGTGGCGCGGTATCTCGCGACGGTGCACGTGGAGGACCTCGCCCTCGCGGCCGCATGCCGGGAGGGAAACGGGCCCGCGTGGGACCACTTCGTCCTGCACTTCCGTCCGGCGCTGTACGCCGCGGCCCGGAGCGTGGCCGGAGACGCCCACCGCGACCTGGCCGATTCGCTGTATGCGGAGCTCTATGGCGTGTCCAATGCCGGCGAGGAGCGTACCTCGCTGCTCGCCTGGTACCACGGGCGCAGCCGTCTCCTCACCTGGGTCCGCTCCGTGCTGGTGCAGCGTCACATCGACGCGCGCCGCGCCGCCTCCCGCACCGAACAGTGGGACCCCGACGACGAGAGCGCCCCCGGAGGACGCGAACGTGGGTATGCGTCGACGCCTGACCCTGGTCGGGCGCATGCGGTCGCCATCGCGCAGGACGCGCTCGATCGAGCGATCGCCGCACTGGAGGCACGGGACCGCCTGCGCCTGCGGCTGTACTACGGCGAGGATCTCACCCTGGCACAGGTCGGGCGGATCACCGGCGAGCACGAGGCGACGGTATCGCGCAAGCTCGATCGGGCGCGCGCGGACCTCCGGCGGCGCGTCGAACGACACCTCCGCGCCGAACACGGCCTGAGTGATGCCGCCATCGCCGAGTGCTTCGCATACGCCGCGGCGGCTCCCGAGCTTCACCTCACCCGCCTGCTCTCGAGAGCCGATGACGGCTGA
PROTEIN sequence
Length: 294
MGCQDLPAFVAAQSRLIAGLYARSGAERWALSQESLAQALHRSTTHRFPDGATEGEVARYLATVHVEDLALAAACREGNGPAWDHFVLHFRPALYAAARSVAGDAHRDLADSLYAELYGVSNAGEERTSLLAWYHGRSRLLTWVRSVLVQRHIDARRAASRTEQWDPDDESAPGGRERGYASTPDPGRAHAVAIAQDALDRAIAALEARDRLRLRLYYGEDLTLAQVGRITGEHEATVSRKLDRARADLRRRVERHLRAEHGLSDAAIAECFAYAAAAPELHLTRLLSRADDG*