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S1-18-all-fractions_k255_6832697_1

Organism: S1-18-all-fractions_metab_conc_1

partial RP 33 / 55 BSCG 38 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: comp(2..805)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6B7BA similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 274.0
  • Bit_score: 389
  • Evalue 1.50e-105
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=83262 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium immunogenum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 290.0
  • Bit_score: 370
  • Evalue 1.80e-99
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 283.0
  • Bit_score: 366
  • Evalue 5.10e-99

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Taxonomy

Mycobacterium immunogenum → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
GTGACGAAGACCGTCGCCGCGCCCGCCAAGAAGGCGCCCGCCAAGAAGGCGCCCGCGAAGAAGGCACCCGCGAAGAAGGCGGCCGGCAAGGCTGCCCCCGGTAGCACCGACGTCGTGGATCCGGCGCTGGCCGACTCCGCCGACCCGTCGGTGGACGTCGAGCCGACCGACATCCCGGCCGACATCGAGCTCGAAGAGGTCCCGATCGACGTCGAGGCCGACGCCGAGACCGAGACCGAGGCCGAGCCCCCGGAGGCGGAGTCCTCGGAGTTCACCTGGGACGAGGAGGAGTCCGAGGCGTTGCGGCAGGCCCGCAAGGACGCCGAGATGACCGCCTCGGCCGACTCGGTGCGTGCCTACCTCAAGCAGATCGGCAAGGTCGCGCTGCTCAACGCCGAGGAGGAGGTCGATCTCGCCAAGCGGATCGAGGCCGGCCTGTACGCCTCCGAGCGGCTGCGCCAGCTCGAGGTCGCCGGCGACAAGCTGCCGCTGCAGCAGCGCCGGGACCTGAACTGGATCGTCCGCGACGGCGAGCGCGCCAAGAACCACCTGCTGGAGGCCAACCTGCGGCTGGTGGTGTCGCTGGCCAAGCGCTACACCGGCCGTGGCATGGCGTTCCTGGACCTGATCCAGGAGGGCAACCTGGGACTGATCCGGGCGGTCGAGAAGTTCGACTACACCAAGGGCTTCAAGTTCTCGACGTATGCGACCTGGTGGATCCGGCAGGCCATCTCGCGGGGTATGGCCGACCAGGGCCGGACCATCCGGCTGCCCGTGCACCTGGTCGAACAGGTCAACAAGCTG
PROTEIN sequence
Length: 268
VTKTVAAPAKKAPAKKAPAKKAPAKKAAGKAAPGSTDVVDPALADSADPSVDVEPTDIPADIELEEVPIDVEADAETETEAEPPEAESSEFTWDEEESEALRQARKDAEMTASADSVRAYLKQIGKVALLNAEEEVDLAKRIEAGLYASERLRQLEVAGDKLPLQQRRDLNWIVRDGERAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAISRGMADQGRTIRLPVHLVEQVNKL