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S1-18-all-fractions_k255_2556225_12

Organism: S1-18-all-fractions_metab_conc_1

partial RP 33 / 55 BSCG 38 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: comp(9114..10067)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B47A7B similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 302.0
  • Bit_score: 372
  • Evalue 3.90e-100
RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 288.0
  • Bit_score: 299
  • Evalue 9.10e-79
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:AGZ42529.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 288.0
  • Bit_score: 299
  • Evalue 4.50e-78

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Taxonomy

Actinoplanes friuliensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGATGACGATGAGTCACAAGGCCCCCGTGGCAATCAGGCCGGCACCCCTGTCGGCCGAGCCGGCCGTCAAGGTGTGCCCTCCCGATGTCGAGAACCTGATCCGGGAGAACCTGGCGCTGGTCGGACACATCGTCCGCGAAACCATGACCCGGCTGCCGGCCCACATCGGCCGCGACGACCTCATCTCCGCGGGCATGACCGCGCTGGTGCTGAGCGCGCAGGGCTATGACGACTCGCGCGGCGTGCCCTTCGCCCGCTTCGCCGCCATCCGGATCCGCGGTGCCCTGGTCGACGAGCTGCGCTCGATGGACTGGGCCAGCCGGTCGGTGCGTGGCCGGGCCCGCGAGGTCGAGGCCGCCCGCAACCAGCTCGCGGTGAGCCTGGGACGCTCGCCCCGGCCGCAGGAGGTCGCCGAGACCCTCGGGGTCAGCGTCTCCGAGCTGGGCAGCATCGACGCCGACGTGCACCGCGCCAGCGTGCTGAGCCTGCAGGGCTTCGCACCCGAGACTGGTGCCGCCATGGTGGCCGACGGCCAGCGCGGCCCCGAGCAGCTGGTCCTGGACCGCGAGCAGCTGGGCTACCTGCACGACGCGATCGCCGAGCTGCCCGACCGGCTGCGCCACGTCGTCCGGGCCTACTTCTTCGAGCAGCGGCAGATGGCAGACATCGCCGCCGAGCTCGGTGTCACCGAATCCCGGATTTCCCAGCTGCGCGCCGAGGCCCTCAAGCTGCTGCGGCACGGCCTGGCCAGTGCCGAGCCCGAGATCGCCGAGCCGGTCGAGCCGACCGGCCGGGCCGGTGCCCGGATCGCCAGCTACGCGGCAGCGGTGGCTGCCCGGGGGACACTGTCCTCCCGGCTGCGGATGTCCAACTCGTTCGGCGAGACCGCCTCCACGCAGTACGCCGCCGCGCAGCGCCGGCACGTCGAGCTCGACCGTACCTCGATCGCTTAA
PROTEIN sequence
Length: 318
MMTMSHKAPVAIRPAPLSAEPAVKVCPPDVENLIRENLALVGHIVRETMTRLPAHIGRDDLISAGMTALVLSAQGYDDSRGVPFARFAAIRIRGALVDELRSMDWASRSVRGRAREVEAARNQLAVSLGRSPRPQEVAETLGVSVSELGSIDADVHRASVLSLQGFAPETGAAMVADGQRGPEQLVLDREQLGYLHDAIAELPDRLRHVVRAYFFEQRQMADIAAELGVTESRISQLRAEALKLLRHGLASAEPEIAEPVEPTGRAGARIASYAAAVAARGTLSSRLRMSNSFGETASTQYAAAQRRHVELDRTSIA*