ggKbase home page

S1-18-all-fractions_k255_2556225_22

Organism: S1-18-all-fractions_metab_conc_1

partial RP 33 / 55 BSCG 38 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: 17885..18487

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigK n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B45240 similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 191.0
  • Bit_score: 287
  • Evalue 8.00e-75
RNA polymerase sigma factor sigK {ECO:0000313|EMBL:CCI54316.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 191.0
  • Bit_score: 227
  • Evalue 1.40e-56
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 186.0
  • Bit_score: 224
  • Evalue 2.30e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetrasphaera jenkinsii → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGACTGCTATGTGGTTCGAGCGGTCCAACTCCGGCGATCCCAAGGCCGAGCCCCCTCCCCGGACCCTGGAGGACCTGGTGGCGGCGGCCGCCCGTGGCGACGAAGCCGCCTTCGCCACCGTCTACGACCAGACTTCGGCCCGGGTCTACGGCATGGTGCTGCGGGTGGTGCGCGACCCCGCCCAGGCCGCCGAAGTCACCCAGGACGTCTACCTCGAGGTGTGGCGGCAGTCGGCCCGCTTCGACGCCGGCAAGGGCAGCGCGCTCCCCTGGCTGCTGATGATCGCCCACCGGCGGGCGGTGGACCGGGTGCGCTCGGCCCAGTCGTCGATGGTGCGCGACGACAAGTACGCGCTGCTGCACGAGGAGCGGCCCTACGACTCGGTCAGCGAGCAGGTCCAGAGCAGCCTGGAGGCCCAGCGGGTCCGCCGGGTGCTCGGTGACCTGACCCCCGCCCAGCGGGAGGCGGTCACGCTCGCCTACTTCGGCGGGTACACCCATACCGAGGTGGCCGAGTTGCTGAAGGTGCCCCTGGGCACCGTGAAGACCCGGATCCGGGACGGACTGATCAGGATGCGCGATGCACTGGGGGTGACGGCATGA
PROTEIN sequence
Length: 201
MTAMWFERSNSGDPKAEPPPRTLEDLVAAAARGDEAAFATVYDQTSARVYGMVLRVVRDPAQAAEVTQDVYLEVWRQSARFDAGKGSALPWLLMIAHRRAVDRVRSAQSSMVRDDKYALLHEERPYDSVSEQVQSSLEAQRVRRVLGDLTPAQREAVTLAYFGGYTHTEVAELLKVPLGTVKTRIRDGLIRMRDALGVTA*