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S1-18-all-fractions_k255_156833_7

Organism: S1-18-all-fractions_metab_101

near complete RP 47 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 7
Location: comp(3847..5082)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZQ5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 407.0
  • Bit_score: 580
  • Evalue 9.30e-163
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH17052.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 407.0
  • Bit_score: 580
  • Evalue 1.30e-162
putative RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 411.0
  • Bit_score: 542
  • Evalue 8.00e-152

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Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGAGCGAGCCGGTGGTCGCGGCGGTCGCCTCGGCGCACCGCCGCGACTGGGGCCAGGTGCTCGCCACCACGGCGCAGCTGACCGGCGACCTGGACCTCGCCGAGGAGTGCACCCAGGAGGCGTTCGTCCGGGCCCTGACGGTGTGGCCGCGCAGCGGCATCCCGGACAAGCCCGGCGCGTGGCTCACCCAGGTGGCGCGCAACCAGGCCCGTGACGAGCTCCGCCGGCGGGCCGCGTTCCGCCGGCGGATGCCGCTGCTGGTCACCGGCGACCCGGTGCCGGGGCCGGAGGACGGGCTGGACGACGACCGGCTCCGGCTGATCTTCACCTGCTGCCACCCGGCGCTGTCCCCGCCGGCGCAGACCGCGCTGACCCTGCGGCTGGTGTGCGGCCTGTCCACCGCCGAGGTGGCCCGGGCGTTCCTGGTGCCCGAGGCGACCATGGCGGCCCGGATCACCCGCGCCAAGAAGAAGATCGCGGCGGCGCGGATCCCCTACCGGGTGCCGGCCGCCGATCAGCTGGCCGAGCGGGTGACCGCCGTGCTGGCGGTGGTCCACCTGATCTTCACGACCGGCCACACCGCGCCGACCGGTCCCCGGCTGATCCGGCACGACCTGCTCGACCGGGCTCTCGACCTCGGCCGGCTGTTGCACCTGCTGATGCCGGGCCAGGCCGAGGTCACCGGGCTGCTGGCGCTGATGCTGCTGATCGACGCCCGGTCGGCCACCCGGGTGTCGGGCGAGGGGCGGATGCTGCTGCTGTCCGAACAGGACCGGACCCGGTGGGATCGCGGTCTGATCGGCGAAGGCACCGCTCTGCTCACCGACGCGCTGCGCCGGCCGCCGCCGGGCCGGTACGTCCTGCAGGCGGCGATCGCCGCCGTACACGCCGAGGCGCCGAGCTGGGAGCGAACCGACTGGCCGGAGATCGTCGGCCGGTACGAGCTGCTGCTGCGCCGGTGGCCGTCGCCGGTCGTCCGGCTCAACCACGCCGTGGCGATCGGGCTGCGGGACGGCCCGCGGGCCGGGCTGGACGCGCTGGCCCCGCTGCTCGCCGAGCCGGCGCTGGCCACGTACCCCTATCTCAGCGCCGCGCGGGCCGACTTCCTGAACCGGCTGCACCGGTGGCCGGAGGCCGCCGAGGCGTACGAAGAGGCTCTCGCGCTCACCGACAACGAGCCGGAACGCCGGTTCCTGGGTGACCGGCTCGGCGAGGTGCGGACCGCCGGTCAGTAG
PROTEIN sequence
Length: 412
MSEPVVAAVASAHRRDWGQVLATTAQLTGDLDLAEECTQEAFVRALTVWPRSGIPDKPGAWLTQVARNQARDELRRRAAFRRRMPLLVTGDPVPGPEDGLDDDRLRLIFTCCHPALSPPAQTALTLRLVCGLSTAEVARAFLVPEATMAARITRAKKKIAAARIPYRVPAADQLAERVTAVLAVVHLIFTTGHTAPTGPRLIRHDLLDRALDLGRLLHLLMPGQAEVTGLLALMLLIDARSATRVSGEGRMLLLSEQDRTRWDRGLIGEGTALLTDALRRPPPGRYVLQAAIAAVHAEAPSWERTDWPEIVGRYELLLRRWPSPVVRLNHAVAIGLRDGPRAGLDALAPLLAEPALATYPYLSAARADFLNRLHRWPEAAEAYEEALALTDNEPERRFLGDRLGEVRTAGQ*