ggKbase home page

S1-18-all-fractions_k255_2502939_8

Organism: S1-18-all-fractions_metab_101

near complete RP 47 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 7
Location: comp(5809..7074)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036E4919 similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 401.0
  • Bit_score: 639
  • Evalue 2.30e-180
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 406.0
  • Bit_score: 634
  • Evalue 1.20e-179
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB32806.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 406.0
  • Bit_score: 634
  • Evalue 6.00e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kribbella flavida → Kribbella → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGGAGGAGGCAGCCGTCCGCCCACCGGCCGGGGACCCGGCGGCGCTGGCCGCCGAGGTGTTCCGGGAGGAACGCGGGCGGCTGCTCGCCGCCCTGGTCAGCCGGTTCGGCGACCTCGACCTGGCCGAGGAGGTCACCTCCGAGGCGATCGAGGCCGCGCTGGCGCGCTGGCCGGCCGACGGGGTGCCGCCCCGGCCCGGTGCGTGGCTGATGACCACCGCCCGGCGCCGGGCGATCGACCGGTTGCGCCGCGACCGGGCGTACGCCGCCCGGCTGGCCCTGCTGCAGGTCGAGGCGGACCGGGCCGCACCGGCGCCGGCCGCCGACGCCGGCGGGGAGCTGCCCGACGAGCGGCTGCAGCTGTTCTTCACCTGCGCCCATCCGGCGCTGGCCGAGGAGGACCGCGGCGCGCTCACCCTGCGCTGCCTGGCCGGCCTCACCACGATCGAGGTGGCCCGGGCGTTCCTGGTGCCGCCGGAGACGATGGCCAAGCGGATCACCCGGGCCAAACGGAAGATCCGCGAGGCGCGCATCCCGTTCCGGGTACCTGGAACCGACGAACTGCCGGAGCGGCTTCCGGGGGTGCTCCAGGTGATCTATTCGATCTTCACCGAGGGGTACGCGGCCAGTACCGGCGACCGGCTGCAGCGGCTCGACCTGGCCGAGGAGGCGATCCGGCTGGCCCGCATCCTGCGCGCGTTGCTGCCCGCCGAACGGGAGGTCGCCGGGCTGCTCGGGCTGATGCTGCTGATCCACGCCCGGCGCGAGGCCCGGACCGGCCCGGACGGAGTGCCGCTGATGCTGGACGAGCAGGACCGCGCGCGCTGGGACCGGGCGCTGATCGAGGAGGGCGCCCGGCTGGTGTCCGCCGCGCTGACCGGTGGGCCGGCCGGGCCGTACGCGGTGCAGGCCGCCATCGCGGCGCTGCACGACGACGCCGCGGACGTGATCACCACCGACTGGCCACAGATCGTGGCCCTGTACGACGTCCTGCTCGCGCTCACCCCGTCCCCGGTGGTCGCGCTGAACCGGGCGGCCGCCGTGGCCATGCGCGACGGCCCGGCCGCCGGCCTGGCTCTGCTGGACACGCTGGCCGGCGAGCCGGTGCTGAGTGGCTACCACCCGTACTGGGTGGCCCGCGCCGACCTGCTGCACCGCCTGGACCGCCGGGCCGAGGCCGCCGGGGCGTACCGCCGGGCGTTCCAGCTGGCCGGCACCGAAGCCGAGCGCGAGCTGCTGCGCCGCCGGCTGGCCGCCGTACGGTGA
PROTEIN sequence
Length: 422
MEEAAVRPPAGDPAALAAEVFREERGRLLAALVSRFGDLDLAEEVTSEAIEAALARWPADGVPPRPGAWLMTTARRRAIDRLRRDRAYAARLALLQVEADRAAPAPAADAGGELPDERLQLFFTCAHPALAEEDRGALTLRCLAGLTTIEVARAFLVPPETMAKRITRAKRKIREARIPFRVPGTDELPERLPGVLQVIYSIFTEGYAASTGDRLQRLDLAEEAIRLARILRALLPAEREVAGLLGLMLLIHARREARTGPDGVPLMLDEQDRARWDRALIEEGARLVSAALTGGPAGPYAVQAAIAALHDDAADVITTDWPQIVALYDVLLALTPSPVVALNRAAAVAMRDGPAAGLALLDTLAGEPVLSGYHPYWVARADLLHRLDRRAEAAGAYRRAFQLAGTEAERELLRRRLAAVR*